igemsoftware / SYSU-Software-2015Links
C.O.R.E. A software created by the SYSU-Software iGEM team.
☆12Updated 10 years ago
Alternatives and similar repositories for SYSU-Software-2015
Users that are interested in SYSU-Software-2015 are comparing it to the libraries listed below
Sorting:
- ☆31Updated 9 years ago
- Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly☆529Updated 2 years ago
- FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON…☆205Updated 3 years ago
- WeGene 微解读专业版开发者文档☆28Updated last month
- A flexible framework for rapid genome analysis and interpretation☆317Updated 3 years ago
- Next generation sequencing reads de novo assembler.☆237Updated 2 months ago
- Ultrafast de novo assembly for long noisy reads (though having no consensus step)☆344Updated 4 months ago
- Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data☆214Updated 5 years ago
- Fast genome and metagenome distance estimation using MinHash☆426Updated 2 months ago
- Spliced read mapper for RNA-Seq☆92Updated 2 years ago
- A high performance and compression ratio compressor for genomic data, powered by GTXLab of Genetalks.☆170Updated 3 years ago
- Application and Python module for average nucleotide identity analyses of microbes.☆218Updated 4 months ago
- GFF and GVF specification documents☆216Updated last year
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆274Updated 2 weeks ago
- de novo sequence assembler using string graphs☆242Updated 6 years ago
- Detect and visualize target mutations by scanning FastQ files directly☆156Updated 3 years ago
- Reads simulator☆282Updated 4 years ago
- a toolkit for working with Oxford nanopore data☆245Updated 2 years ago
- C++ API & command-line toolkit for working with BAM data☆428Updated 6 months ago
- Clustering cONtigs with COverage and ComposiTion☆135Updated 5 years ago
- Short read de novo assembler using de Bruijn graphs, as published in: D.R. Zerbino and E. Birney. 2008. Velvet: algorithms for de novo sh…☆293Updated last month
- samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.☆236Updated 4 years ago
- A fast approximate aligner for long DNA sequences☆283Updated last year
- This repo is DEPRECATED. Please use minimap2, the successor of minimap.☆106Updated 8 years ago
- Accurate Species TRee ALgorithm☆268Updated last year
- Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.☆148Updated 4 years ago
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins☆207Updated 3 months ago
- A tool to circularize genome assemblies☆249Updated last year
- Biopython Tutorial Chinese Translation☆238Updated 5 years ago
- ☆269Updated 5 months ago