Alternatives and similar repositories for HPC-intro

Users that are interested in HPC-intro are comparing it to the libraries listed below

• EPFL-LCSB / skimpy
  Symbolic Kinetic Models with Python
  ☆32Updated 4 months ago
• virtualramblas / awesome-deep-learning-4-life-sciences
  A collection of resources for Deep Learning in Python for Life Sciences (with focus on biotech and pharma).
  ☆140Updated last week
• MachineLearningLifeScience / meaningful-protein-representations
  ☆110Updated 3 years ago
• valence-labs / mtl_summer_school_2024
  ☆45Updated last year
• kexinhuang12345 / ml-genomics-resources
  Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
  ☆80Updated 3 years ago
• sissa-data-science / DADApy
  Distance-based Analysis of DAta-manifolds in python
  ☆134Updated 3 months ago
• ml-jku / cloome
  ☆36Updated 11 months ago
• Novartis / ChemBioMultimodalAutoencoders
  a package for streamlined multidomain data integration and translation based on cross-modal autoencoders architectures
  ☆29Updated 2 years ago
• ENCCS / gnn-transformers
  Workshop lesson material for the GNN and Transformers workshop
  ☆18Updated 2 years ago
• genedisco / genedisco
  GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.
  ☆40Updated 2 years ago
• genbio-ai / AIDO
  AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…
  ☆123Updated 3 weeks ago
• JBEI / ART
  A machine learning tool to improve the effectiveness of strain engineering in synthetic biology
  ☆58Updated 2 weeks ago
• ramanathanlab / genslm
  GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics
  ☆137Updated last year
• dimiboeckaerts / ProteinLanguageWorkshop
  An introductory workshop to protein language models
  ☆16Updated 3 years ago
• azminewasi / Awesome-MoML-NeurIPS24
  ALL Molecular ML papers from NeurIPS'24.
  ☆61Updated 10 months ago
• OATML-Markslab / EVEscape
  Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"
  ☆65Updated last year
• noegroup / paper_boltzmann_generators
  ☆89Updated 3 years ago
• chaitjo / geometric-rna-design
  gRNAde: Geometric Deep Learning for 3D RNA inverse design (ICLR 2025 Spotlight)
  ☆213Updated 7 months ago
• navid-naderi / PLM_SWE
  Implementation code for the paper "Aggregating Residue-Level Protein Language Model Embeddings with Optimal Transport"
  ☆21Updated 5 months ago
• anyuzx / HIPPS-DIMES
  3D Genome Reconstruction and Dynamics Prediction: Maximum Entropy Based HI-C/Distance Map - Polymer Physics - Structures Method
  ☆13Updated last week
• naity / finetune-esm
  Scalable Protein Language Model Finetuning with Distributed Learning and Advanced Training Techniques such as LoRA.
  ☆27Updated last year
• yigbt / deepFPlearn
  Link molecular structures of chemicals (in form of topological fingerprints) with multiple targets
  ☆10Updated 9 months ago
• mims-harvard / ProCyon
  ProCyon: A multimodal foundation model for protein phenotypes
  ☆45Updated last month
• brianhie / viral-mutation
  Language modeling of viral evolution
  ☆148Updated 2 years ago
• aamini / chemprop
  Fast and scalable uncertainty quantification for neural molecular property prediction, accelerated optimization, and guided virtual scree…
  ☆124Updated 4 years ago
• mims-harvard / PINNACLE
  Contextual AI models for single-cell protein biology
  ☆88Updated 7 months ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆41Updated 6 months ago
• BuildACell / bioCRNpyler
  A modular compiler for biological chemical reaction networks
  ☆47Updated 3 weeks ago
• Vincentx15 / Equi-RC
  Equivariant layers for RC-complement symmetry in DNA sequence data
  ☆11Updated 3 years ago
• pb3lab / ibm3202
  Google Colab Tutorials for IBM3202
  ☆267Updated 11 months ago