End-to-end pipeline for PPIFlow
☆23Feb 17, 2026Updated 2 months ago
Alternatives and similar repositories for PPIFlow-Pipeline
Users that are interested in PPIFlow-Pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆292Sep 23, 2025Updated 6 months ago
- ☆132Mar 10, 2026Updated last month
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Sep 3, 2021Updated 4 years ago
- The code for UniPMT☆18Mar 16, 2025Updated last year
- ☆19Oct 2, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automatic Martini force field generator for small organic molecules (up to 25 heavy atoms), Martini 3 compatible☆37Mar 23, 2026Updated 3 weeks ago
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆13Feb 11, 2026Updated 2 months ago
- alphafold FAPE loss☆10Sep 28, 2021Updated 4 years ago
- 这里提供了一个yaml可以通过conda来快速无痛一键安装ESMfold,算是已经踩过所有通过官方安装遇到的暗坑了。☆18Jan 31, 2024Updated 2 years ago
- ☆19May 30, 2025Updated 10 months ago
- EXPRORER: Rational cosolvents set construction method for cosolvent molecular dynamics (CMD) with large-scale computation☆11Jul 28, 2022Updated 3 years ago
- Implementation of the latest developments in NLP ranging from ensemble learning to BERT. Pipelines are in Tensorflow and Pytorch☆13Oct 30, 2020Updated 5 years ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆79Mar 7, 2026Updated last month
- ☆10Nov 23, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆14Feb 28, 2022Updated 4 years ago
- a pipeline to process data of PEM-seq or data similar, which is more comprehensive than superQ☆10Feb 24, 2026Updated last month
- A collection of tools that generate and analyse side-chain rotamer libraries☆10Apr 11, 2026Updated last week
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- ☆22Apr 10, 2025Updated last year
- Repository to perform mapping of new datasets to the Human Lung Cell Atlas.☆20Jun 7, 2023Updated 2 years ago
- The Family of Diffusion Protein Language Models (DPLM)☆318Jul 25, 2025Updated 8 months ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- A molecule generative model used interaction fingerprint (docking pose) as constraints.☆15Feb 13, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆21Mar 20, 2025Updated last year
- ☆17May 15, 2025Updated 11 months ago
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆56Dec 27, 2023Updated 2 years ago
- Overlapped primer design for entire coding sequence of the gene with specificity check☆13Feb 22, 2022Updated 4 years ago
- ☆12Jun 19, 2021Updated 4 years ago
- pytorch implementation of trDesign☆45Mar 19, 2021Updated 5 years ago
- A DP beam-search extension of Mitchell Stern's span-based neural constituency parser☆11Aug 24, 2022Updated 3 years ago
- The Process Intelligence Tool for Linux☆35Mar 10, 2026Updated last month
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆64Dec 17, 2025Updated 4 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Gaussian process models for optimizing channelrhodopsin properties.☆13May 30, 2020Updated 5 years ago
- ☆19Nov 21, 2025Updated 4 months ago
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated last year
- Providing high-quality translations for docx while maintaining document formattin☆11Dec 16, 2024Updated last year
- a lightweight distogram-prediction model trained via contrastive learning☆14Dec 26, 2025Updated 3 months ago
- Pytorch version of Continuous Language Generative Flow (ACL 2021)☆11Sep 14, 2021Updated 4 years ago
- A tool for setting up free energy simulations.☆36Oct 20, 2022Updated 3 years ago