choderalab / automatic-equilibration-detectionLinks
Automatic detection of equilibrated regions of molecular simulations
☆17Updated 9 years ago
Alternatives and similar repositories for automatic-equilibration-detection
Users that are interested in automatic-equilibration-detection are comparing it to the libraries listed below
Sorting:
- Quickly generate, start and analyze benchmarks for molecular dynamics simulations.☆80Updated last year
- Physical validation of molecular simulations☆57Updated last month
- Reads Gromacs EDR file to populate a pandas dataframe☆33Updated 3 months ago
- This library tackles the construction and efficient execution of computational chemistry workflows☆52Updated 2 years ago
- Python bindings for TNG file format☆13Updated 3 months ago
- A plugin that allows the use of Tensorflow in Hoomd-Blue for GPU-accelerated ML+MD☆33Updated last year
- An open source Python framework for transition interface and path sampling calculations.☆116Updated last month
- ☆11Updated last year
- Dynamic Histogram Analysis To Determine Free Energies and Rates from Biased Simulations☆20Updated 7 years ago
- A comprehensive tool for analyzing liquid solvation structure.☆54Updated 2 months ago
- Materials for the 2021 PRACE Workshop @ SurfSARA☆30Updated 4 years ago
- Suite of programs to perform non-linear dimensionality reduction -- sketch-map in particular☆48Updated last year
- A general small molecule force field descended from AMBER99 and parm@Frosst, available in the SMIRNOFF format☆31Updated last month
- MDAnalysis wrapper around Packmol☆37Updated 2 years ago
- Fast PBC wrapping and unwrapping for VMD☆24Updated last year
- Dihedral scanner with wavefront propagation☆35Updated 9 months ago
- A class for conversion between zmatrices and cartesian coordinates☆34Updated 5 years ago
- Software Suite for Advanced General Ensemble Simulations☆90Updated 2 years ago
- ☆11Updated 4 years ago
- Best Practices article intended for LiveCoMS☆42Updated 6 years ago
- A project (and object) for storing, manipulating, and converting molecular mechanics data.☆88Updated this week
- Psi4Education Labs Public Repository. If you are submitting a new lab, please submit it to the psi4education-instructor repo.☆55Updated 3 years ago
- Generate coarse-grained molecular dynamics models from atomistic trajectories.☆65Updated 2 months ago
- ☆86Updated 4 months ago
- Data generation and submission scripts for the QCArchive ecosystem.☆36Updated this week
- Python version of the modified Seminario method code☆16Updated 5 years ago
- ☆62Updated 7 months ago
- A client interface to the QCArchive Project (read-only image of QCFractal)☆34Updated 2 years ago
- A fast solver for large scale MBAR/UWHAM equations☆40Updated last year
- Analyse Rotational Diffusion Tensor from MD Simulations☆22Updated last year