mosdef-hub / mosdef-workflowsLinks
Sample molecular simulation workflows using a MoSDeF and community tools
☆14Updated 3 years ago
Alternatives and similar repositories for mosdef-workflows
Users that are interested in mosdef-workflows are comparing it to the libraries listed below
Sorting:
- A package for deriving coarse-grain potentials using MultiState Iterative Boltzmann Inversion (MS-IBI)☆17Updated last week
- Cassandra is a Monte Carlo package to conduct atomistic simulations.☆45Updated last year
- A generalized deep learning approach for local structure identification in molecular simulations. See https://doi.org/10.1039/C9SC02097G …☆17Updated 5 years ago
- A client interface to the QCArchive Project (read-only image of QCFractal)☆34Updated last year
- A comprehensive tool for analyzing liquid solvation structure.☆53Updated 2 weeks ago
- MDAnalysis wrapper around Packmol☆33Updated 2 years ago
- A package for atom-typing as well as applying and disseminating forcefields☆132Updated last week
- An interactive structure viewer alongside its simulated diffraction pattern☆18Updated 5 months ago
- Software Suite for Advanced General Ensemble Simulations☆88Updated 2 years ago
- A project (and object) for storing, manipulating, and converting molecular mechanics data.☆77Updated this week
- A plugin that allows the use of Tensorflow in Hoomd-Blue for GPU-accelerated ML+MD☆32Updated last year
- Python interface to the KIM API. See https://openkim.org/kim-api for more information about the KIM API.☆16Updated 3 months ago
- HOOMD-blue example scripts.☆36Updated last month
- This library tackles the construction and efficient execution of computational chemistry workflows☆49Updated last year
- MoSDeF-GOMC: Python software for the creation of scientific workflows for the Monte Carlo simulation engine GOMC☆16Updated 5 months ago
- Molecular structure optimizer☆124Updated 2 years ago
- Thermal and photochemical reaction path optimization and discovery☆68Updated last year
- Physical validation of molecular simulations☆56Updated last month
- Reads Gromacs EDR file to populate a pandas dataframe☆33Updated 8 months ago
- A scalable and versatile library to generate representations for atomic-scale learning☆82Updated last year
- ☆19Updated 2 weeks ago
- A Python package for estimating diffusion properties from molecular dynamics simulations.☆72Updated last week
- Light-weight tight-binding framework☆153Updated last week
- Collection of 'compound scripts' for use with the ORCA quantum chemistry software☆82Updated last month
- A set of tutorials to introduce new users to the MoSDeF (Molecular Simulation Design Framework) toolkit☆26Updated last year
- Efficient And Fully Differentiable Extended Tight-Binding☆98Updated 3 weeks ago
- An open source Python framework for transition interface and path sampling calculations.☆112Updated 2 months ago
- Python bindings for TNG file format☆13Updated 8 months ago
- Yet Another extended Hueckel Molecular Orbital Package☆26Updated 4 months ago
- The Open Knowledgebase of Interatomic Models (OpenKIM) aims to be an online resource for standardized testing, long-term warehousing and …☆32Updated 2 months ago