mosdef-hub / mosdef-workflows
Sample molecular simulation workflows using a MoSDeF and community tools
☆14Updated 2 years ago
Alternatives and similar repositories for mosdef-workflows:
Users that are interested in mosdef-workflows are comparing it to the libraries listed below
- Cassandra is a Monte Carlo package to conduct atomistic simulations.☆43Updated 9 months ago
- MoSDeF-GOMC: Python software for the creation of scientific workflows for the Monte Carlo simulation engine GOMC☆14Updated this week
- A set of tutorials to introduce new users to mBuild☆10Updated 3 years ago
- An interactive structure viewer alongside its simulated diffraction pattern☆18Updated this week
- A package for managing pair-potential derivation using MultiState Iterative Boltzmann Inversion (MS-IBI)☆13Updated 6 months ago
- A lightweight package with the periodic table of the elements☆12Updated 3 years ago
- MDAnalysis wrapper around Packmol☆30Updated last year
- A VMD molfile plugin reader for HOOMD-blue GSD files.☆15Updated 3 months ago
- A comprehensive tool for analyzing liquid solvation structure.☆46Updated 7 months ago
- a tool for creating Molecular Dynamics-ready models of polymeric systems☆22Updated 6 years ago
- A generalized deep learning approach for local structure identification in molecular simulations. See https://doi.org/10.1039/C9SC02097G …☆17Updated 4 years ago
- This library tackles the construction and efficient execution of computational chemistry workflows☆47Updated last year
- MLP training for molecular systems☆43Updated this week
- Physical validation of molecular simulations☆56Updated 2 months ago
- Gromacs Topology Files for common Ionic Liquids☆19Updated 3 months ago
- A Python package for estimating diffusion properties from molecular dynamics simulations.☆63Updated 2 weeks ago
- Python version of the modified Seminario method code☆16Updated 4 years ago
- The future of Packmol☆30Updated 3 months ago
- A plugin that allows the use of Tensorflow in Hoomd-Blue for GPU-accelerated ML+MD☆31Updated 7 months ago
- Python interface to the KIM API. See https://openkim.org/kim-api for more information about the KIM API.☆16Updated 7 months ago
- Flexible Library of Organic Workflows and Extensible Recipes for Molecular Dynamics.☆15Updated this week
- A project (and object) for storing, manipulating, and converting molecular mechanics data.☆73Updated this week
- A PyMOL plugin for visualizing vibrations in molecules and solids☆42Updated 5 months ago
- A set of tutorials to introduce new users to the MoSDeF (Molecular Simulation Design Framework) toolkit☆26Updated 11 months ago
- Materials for the 2021 PRACE Workshop @ SurfSARA☆31Updated 3 years ago
- Tool for finding atomic environments in crystal structures☆21Updated 8 months ago
- Automated workflow for generating quantum chemistry calculation of explicitly solvated molecules☆50Updated last week
- ☆57Updated 3 months ago
- Tight Binding Machine Learning Toolkit☆36Updated last month
- HOOMD-blue example scripts.☆34Updated this week