Python Vascular Network Analysis
☆28Aug 2, 2026Updated last month
Alternatives and similar repositories for pyvane
Users that are interested in pyvane are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18May 16, 2024Updated 2 years ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…☆50Dec 19, 2023Updated 2 years ago
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆16Apr 29, 2024Updated 2 years ago
- Python Vasculature Biomarker toolbox API☆16Jan 1, 2026Updated 8 months ago
- Optic disk annotations for DRIVE and IOSTAR dataset☆10May 14, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A synthesis pipeline for annotation-free blood vessel segmentation in cerebral 3D OCTA images. Paper accepted @ MICCAI24.☆30Aug 17, 2026Updated last month
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆57Apr 23, 2026Updated 4 months ago
- A software to edit, model and mesh vascular networks from centerlines.☆37Feb 28, 2024Updated 2 years ago
- Package to compute the evaluation metrics for MICCAI TopCoW2024 challenge☆19Sep 24, 2024Updated last year
- Implementation of the DeepVesselNet deep learning network☆156Jul 7, 2023Updated 3 years ago
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling☆48May 9, 2026Updated 4 months ago
- This package contains multiple 3D OCT denoising methods, including our proposed mixed multiscale BM4D (mmBM4D), which is one of the faste…☆20Jun 14, 2024Updated 2 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆56Jun 6, 2024Updated 2 years ago
- Code associated with the paper Cascaded Multitask U-Net using topological loss for vessel segmentation and centerline extraction☆27Jul 22, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Init with augmentation loss☆19Feb 7, 2023Updated 3 years ago
- Vascular Tree Synthesis Software. You will need CMake and ITK to run VascuSynth. Read the paper in the Insight Journal for instructions…☆12Jan 24, 2018Updated 8 years ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆52Jul 19, 2022Updated 4 years ago
- Research Paper - Automated Labelling of Coronary Vessels via Neural Network☆10Oct 12, 2020Updated 5 years ago
- A Lightweight Multi-modality Image Segmentation Network via Domain Adaptation using Gradient Magnitude and Shape Constraint☆10Apr 3, 2023Updated 3 years ago
- [MICCAI 2024] Centerline Boundary Dice Loss for Vascular Segmentation☆95Dec 9, 2025Updated 9 months ago
- Repository for the paper "Synthetic optical coherence tomography angiographs for detailed retinal vessel segmentation without human annot…☆51Sep 1, 2026Updated 2 weeks ago
- Code for "3D Arterial Segmentation via Single 2D Projections and Depth Supervision in Contrast-Enhanced CT Images" @ MICCAI 2023☆15Jan 24, 2025Updated last year
- ☆10Jun 2, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ClearMap 2 with WobblyStitcher, TubeMap and CellMap☆147Jul 22, 2026Updated last month
- MGN-Net: A novel Graph Neural Network for integrating heterogenous graph population derived from multiple sources.☆12Jun 6, 2022Updated 4 years ago
- Binary image skeletonization algorithms for CPUs and Nvidia GPUs☆12Jun 15, 2017Updated 9 years ago
- RITE Dos (Radiotherapy In vivo Two-Dimensional EPID Dosimetry) is MATLAB software package that does just that, provides in vivo dosimetry…☆13Feb 15, 2018Updated 8 years ago
- Code and dataset for the MICCAI 2020 paper: Automated Intracranial Artery Labeling using a Graph Neural Network and Hierarchical Refineme…☆30Aug 6, 2022Updated 4 years ago
- Skeleton Recall Loss for Connectivity Conserving and Resource Efficient Segmentation of Thin Tubular Structures☆154Dec 8, 2025Updated 9 months ago
- An open-source application for the analysis and visualization of segmented vasculature datasets☆139May 18, 2024Updated 2 years ago
- ☆297Feb 14, 2024Updated 2 years ago
- ☆16Jul 14, 2021Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Implementation for OCTAve: 2D en face Optical Coherence Tomography Angiography Vessel Segmentation in Weakly-Supervised Learning with Loc…☆13Feb 4, 2023Updated 3 years ago
- [ECCV'24] cDP-MIL: Robust Multiple Instance Learning via Cascaded Dirichlet Process☆17Sep 10, 2024Updated 2 years ago
- ☆58Jun 1, 2026Updated 3 months ago
- A collection of tools for manipulation of morphological features in patient-specific geometries☆33Sep 26, 2024Updated last year
- FreeCOS: Self-Supervised Learning from Fractals and Unlabeled Images for Curvilinear Object Segmentation (ICCV2023)☆42Sep 7, 2023Updated 3 years ago
- Python API to TalkBankDB.☆13Jan 22, 2024Updated 2 years ago
- ☆14May 20, 2023Updated 3 years ago