Alternatives and similar repositories for snakebids

Users that are interested in snakebids are comparing it to the libraries listed below

• danjgale / reg-fusion
  Python implementation of Wu et al (2018)'s registration fusion
  ☆27Updated 4 years ago
• danjgale / surfplot
  A package for publication-ready brain surface figures
  ☆67Updated this week
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆38Updated 8 months ago
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆49Updated 6 months ago
• Remi-Gau / check_my_code
  Because we all need pointers when it comes to make our code better.
  ☆17Updated 2 months ago
• NSBLab / DiCER
  Diffuse Cluster Estimation and Regression. A de-noising tool.
  ☆19Updated 3 years ago
• compneuro-ncu / fmridenoise
  Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.
  ☆48Updated 2 years ago
• TomMaullin / BLMM
  This repository contains all code for the BLMM toolbox.
  ☆20Updated last year
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• elizabethbeard / mriqception
  A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)
  ☆26Updated 5 years ago
• transatlantic-comppsych / fmriprep_qa_guide
  Rough draft of a guide for reviewing fmriprep's QA outputs
  ☆34Updated 3 years ago
• miykael / atlasreader
  Python interface for generating coordinate tables and region labels from statistical MRI images
  ☆111Updated this week
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆105Updated this week
• PRIME-RE / prime-re.github.io
  Open resource exchange platform for non-human primate neuroimaging
  ☆22Updated last week
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 5 years ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆92Updated this week
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆102Updated last week
• bids-standard / bids-2-devel
  Discussions and suggestions of backwards incompatible changes to BIDS
  ☆12Updated last year
• PeerHerholz / BIDSonym
  a BIDS app for pseudo-anonymization of neuroimaging data
  ☆52Updated 3 weeks ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated last week
• PennLINC / CuBIDS
  Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
  ☆28Updated 2 weeks ago
• spisakt / RPN-signature
  The Resting-state Pain susceptibility Network signature.
  ☆15Updated 3 years ago
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆55Updated last year
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year
• demidenm / PyReliMRI
  Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.
  ☆37Updated last month
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆43Updated last year
• physiopy / phys2bids
  Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, chec…
  ☆66Updated this week
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated last month
• PennLINC / qsirecon
  Reconstruction of preprocessed q-space images (dMRI)
  ☆14Updated this week
• dutchconnectomelab / CATO
  Toolbox for structural and functional brain connectivity reconstruction.
  ☆18Updated last year