khanlab / snakebids

Related projects: ⓘ

• Remi-Gau / check_my_code
  Because we all need pointers when it comes to make our code better.
  ☆17Updated 5 months ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆34Updated 5 years ago
• BMHLab / DiCER
  Diffuse Cluster Estimation and Regression. A de-noising tool.
  ☆19Updated 2 years ago
• transatlantic-comppsych / fmriprep_qa_guide
  Rough draft of a guide for reviewing fmriprep's QA outputs
  ☆22Updated 2 years ago
• danjgale / reg-fusion
  Python implementation of Wu et al (2018)'s registration fusion
  ☆26Updated 3 years ago
• danjgale / surfplot
  A package for publication-ready brain surface figures
  ☆51Updated last month
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆36Updated 2 years ago
• alexteghipco / brainSurfer
  MATLAB toolbox for visualizing brain data on surfaces.
  ☆31Updated 3 weeks ago
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆27Updated 4 years ago
• inm7 / jubrain-anatomy-toolbox
  JuBrain Anatomy Toolbox
  ☆17Updated 5 years ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆53Updated 6 months ago
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆41Updated 3 months ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆57Updated 2 years ago
• elizabethbeard / mriqception
  A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)
  ☆26Updated 4 years ago
• PennLINC / CuBIDS
  Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
  ☆19Updated this week
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆47Updated 9 months ago
• DCAN-Labs / abcd-dicom2bids
  For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of sp…
  ☆19Updated 2 weeks ago
• yeatmanlab / AFQ-Insight
  Statistical learning for AFQ results
  ☆10Updated 2 months ago
• dutchconnectomelab / CATO
  Toolbox for structural and functional brain connectivity reconstruction.
  ☆15Updated this week
• cbinyu / bidsphysio
  Converts physio data to BIDS physiological recording
  ☆12Updated last year
• compneuro-ncu / fmridenoise
  Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.
  ☆47Updated last year
• sina-mansour / Cerebro_Viewer
  A pythonic 3D viewer to visualize and plot brains and neuroimaging data
  ☆31Updated last month
• pGarciaS / PREEMACS
  PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface
  ☆13Updated 3 months ago
• spisakt / RPN-signature
  The Resting-state Pain susceptibility Network signature.
  ☆14Updated 2 years ago
• MASILab / SynBOLD-DisCo
  Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
  ☆16Updated 7 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆40Updated 4 months ago
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆33Updated 4 months ago
• psychoinformatics-de / fairly-big-processing-workflow
  A template for decentralized, reproducible processing
  ☆14Updated last month
• CMRR-C2P / MB
  Support for CMRR multi-band pulse sequences
  ☆57Updated 8 months ago
• ohbm / OpenScienceRoom2019
  Schedule and resources from the OHBM Open Science Room: Rome 2019
  ☆16Updated 5 years ago