khanlab / snakebids
Snakemake + BIDS
☆17Updated last month
Related projects ⓘ
Alternatives and complementary repositories for snakebids
- Tools for mesh surface-based operations☆34Updated 5 years ago
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆26Updated 4 years ago
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆21Updated this week
- Diffuse Cluster Estimation and Regression. A de-noising tool.☆19Updated 2 years ago
- Rough draft of a guide for reviewing fmriprep's QA outputs☆25Updated 2 years ago
- Python implementation of Wu et al (2018)'s registration fusion☆27Updated 3 years ago
- A package for publication-ready brain surface figures☆54Updated 3 months ago
- Because we all need pointers when it comes to make our code better.☆17Updated last month
- For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of sp…☆19Updated 3 weeks ago
- The Resting-state Pain susceptibility Network signature.☆14Updated 2 years ago
- Nuisance removal tool for fMRI data☆55Updated 8 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆72Updated 7 months ago
- Open resource exchange platform for non-human primate neuroimaging☆19Updated last week
- Load fMRIprep confounds in python☆36Updated 2 years ago
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆47Updated this week
- MATLAB toolbox for visualizing brain data on surfaces.☆32Updated 2 months ago
- MATLAB/Octave GIfTI Library☆25Updated 11 months ago
- Nipype implementation of BetaSeries Correlations (Beta)☆32Updated last year
- Support for CMRR multi-band pulse sequences☆57Updated 10 months ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆33Updated 2 weeks ago
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆27Updated 4 years ago
- Generate and run SLURM jobs on HPCs☆12Updated last year
- Converts physio data to BIDS physiological recording☆12Updated last year
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆15Updated 6 months ago
- JuBrain Anatomy Toolbox☆18Updated 5 years ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆47Updated last year
- Consolidate and rearrange fmriprep group reports.☆12Updated 2 years ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆38Updated last year
- Synthetic BOLD images for distortion correction of fMRI without additional calibration scans☆17Updated 9 months ago
- lipsia3.0☆20Updated 4 months ago