khanlab / snakebidsLinks
Snakemake + BIDS
☆21Updated last month
Alternatives and similar repositories for snakebids
Users that are interested in snakebids are comparing it to the libraries listed below
Sorting:
- A package for publication-ready brain surface figures☆69Updated last month
- Tools for mesh surface-based operations☆38Updated 10 months ago
- Rough draft of a guide for reviewing fmriprep's QA outputs☆34Updated 3 years ago
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆50Updated 7 months ago
- Python implementation of Wu et al (2018)'s registration fusion☆27Updated 4 years ago
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆29Updated 5 years ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆48Updated 2 years ago
- This repository contains all code for the BLMM toolbox.☆20Updated last year
- Because we all need pointers when it comes to make our code better.☆17Updated 4 months ago
- Load fMRIprep confounds in python☆38Updated 3 years ago
- Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity☆56Updated last year
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆26Updated 5 years ago
- Diffuse Cluster Estimation and Regression. A de-noising tool.☆19Updated 3 years ago
- Discussions and suggestions of backwards incompatible changes to BIDS☆12Updated last year
- Nipype implementation of BetaSeries Correlations (Beta)☆35Updated 2 years ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆37Updated 3 weeks ago
- The TemplateFlow Archive - A DataLad super-dataset☆93Updated last month
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆29Updated 3 weeks ago
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated 3 years ago
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆106Updated this week
- Python interface for generating coordinate tables and region labels from statistical MRI images☆113Updated 3 weeks ago
- a BIDS app for pseudo-anonymization of neuroimaging data☆53Updated 2 months ago
- Nuisance removal tool for fMRI data☆57Updated last year
- multi atlas transfer tools for neuroimaging (maTT)☆67Updated last year
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data. DEPRICATED! Succeeded by "NiSpace"☆19Updated 7 months ago
- A package to create simple 3D network visualizations on a brain.☆81Updated 4 months ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆41Updated 2 years ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆110Updated this week
- agent-based S-I-R model for neurodegeneration☆21Updated 3 years ago
- Toolbox for structural and functional brain connectivity reconstruction.☆18Updated last year