Alternatives and similar repositories for snakebids

Users that are interested in snakebids are comparing it to the libraries listed below

• danjgale / surfplot
  A package for publication-ready brain surface figures
  ☆67Updated last year
• PRIME-RE / prime-re.github.io
  Open resource exchange platform for non-human primate neuroimaging
  ☆22Updated 2 weeks ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆38Updated 7 months ago
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• NSBLab / DiCER
  Diffuse Cluster Estimation and Regression. A de-noising tool.
  ☆19Updated 3 years ago
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 5 years ago
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆50Updated 4 months ago
• compneuro-ncu / fmridenoise
  Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.
  ☆48Updated 2 years ago
• danjgale / reg-fusion
  Python implementation of Wu et al (2018)'s registration fusion
  ☆27Updated 4 years ago
• SIMEXP / fmriprep-slurm
  Generate and run SLURM jobs on HPCs
  ☆12Updated last month
• transatlantic-comppsych / fmriprep_qa_guide
  Rough draft of a guide for reviewing fmriprep's QA outputs
  ☆33Updated 3 years ago
• Remi-Gau / check_my_code
  Because we all need pointers when it comes to make our code better.
  ☆17Updated last month
• TomMaullin / BLMM
  This repository contains all code for the BLMM toolbox.
  ☆20Updated last year
• PeerHerholz / BIDSonym
  a BIDS app for pseudo-anonymization of neuroimaging data
  ☆52Updated last month
• inm7 / jubrain-anatomy-toolbox
  JuBrain Anatomy Toolbox
  ☆22Updated 6 years ago
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆102Updated last week
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆50Updated last year
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆105Updated last week
• miykael / atlasreader
  Python interface for generating coordinate tables and region labels from statistical MRI images
  ☆107Updated this week
• bids-standard / bids-2-devel
  Discussions and suggestions of backwards incompatible changes to BIDS
  ☆12Updated last year
• dutchconnectomelab / CATO
  Toolbox for structural and functional brain connectivity reconstruction.
  ☆17Updated 11 months ago
• elizabethbeard / mriqception
  A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)
  ☆26Updated 5 years ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆90Updated last week
• khanlab / hippunfold
  BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
  ☆60Updated this week
• netneurolab / ipn-summer-school
  ☆12Updated 4 years ago
• sina-mansour / Cerebro_Viewer
  A pythonic 3D viewer to visualize and plot brains and neuroimaging data
  ☆36Updated last year
• transatlantic-comppsych / fmriprep-group-report
  Consolidate and rearrange fmriprep group reports.
  ☆13Updated 3 years ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆66Updated 10 months ago
• nipy / dmriprep
  MOVED TO https://github.com/nipreps/dmriprep
  ☆17Updated 2 years ago