curie-data-factory / health-data-metrics
Health Data Metrics (HDM) a Data Quality assessment Application.
☆11Updated last year
Related projects ⓘ
Alternatives and complementary repositories for health-data-metrics
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆35Updated 4 months ago
- Mapping the MIMIC-III database to the OMOP schema☆127Updated 7 months ago
- Backend of the Cohort360 web app @ https://github.com/aphp/Cohort360-FrontEnd and the Administration Portal @ https://github.com/aphp/Coh…☆4Updated last week
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆70Updated last year
- A web application to find patients, build cohorts and visualize health records☆42Updated this week
- Python package for machine learning for healthcare using a OMOP common data model☆104Updated last year
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆57Updated last month
- Oncology Working Group Repository☆56Updated 4 months ago
- Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.☆113Updated this week
- ETL Tool for converting datasets to OMOP CDM☆28Updated last year
- A tool to help improve data quality standards in observational data science.☆143Updated this week
- Course materials for OHDSI ETL tutorial☆45Updated 2 weeks ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆76Updated 6 months ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆86Updated 4 months ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆92Updated 5 months ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆98Updated last month
- Annotator building tool for Jupyter☆20Updated 8 months ago
- EDS-Pseudo is a hybrid model for detecting personally identifying entities in clinical reports☆46Updated this week
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆59Updated 2 years ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆59Updated 3 weeks ago
- ☆24Updated 6 years ago
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆98Updated 2 years ago
- FHIR Python Analysis Client and Kit (FHIRPACK) is a general purpose FHIR client that simplifies the access, analysis and representation o…☆48Updated last year
- Tools that make it easier to use FHIR® and clinical terminology within data analytics, built on Apache Spark.☆90Updated this week
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated last year
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆63Updated last month
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆37Updated last month
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆32Updated last year
- Code for BEHRT: Transformer for Electronic Health Records☆107Updated last year