andrealoddo / MP-IDB-The-Malaria-Parasite-Image-Database-for-Image-Processing-and-Analysis
MP-IDB is the public image dataset described in the following article: https://link.springer.com/chapter/10.1007/978-3-030-13835-6_7
☆14Updated 2 years ago
Related projects: ⓘ
- ☆28Updated 3 years ago
- This repository is an attempt to list all malaria parasite imaging datasets (blood smears). Contributions welcome!☆54Updated 4 years ago
- NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells☆19Updated 4 years ago
- StarDist PyTorch☆40Updated last year
- ☆10Updated 3 years ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆17Updated last year
- This repository contains an implementation of a deep learning Mask R-CNN algorithm for nuclei segmentation from whole slide images of tis…☆17Updated 4 years ago
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆19Updated last year
- Core components of PathologyGo, the AI assistance system designed for histopathological inference.☆13Updated 4 years ago
- ☆20Updated 3 weeks ago
- simple package for augmentation of n-dimensional arrays☆32Updated last year
- 🔬 Code-free deep segmentation for computational pathology☆50Updated 3 months ago
- ☆34Updated last year
- ☆15Updated this week
- Interactive Segmentation of Nucleus☆60Updated last year
- Track cells and build cell lineages☆27Updated last month
- An implementation of Mask R-CNN designed for single-cell instance segmentation in the context of multiplexed tissue imaging☆10Updated 2 years ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆72Updated this week
- A deep learning model for single cell segmentation from microsopy images.☆27Updated this week
- SplineDist: Automated Cell Segmentation with Spline Curves☆65Updated 3 months ago
- AnnotatorJ: ImageJ plugin for object annotation in 2D☆22Updated 3 years ago
- Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images☆13Updated 5 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆63Updated last year
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆45Updated 2 years ago
- Metrics for determining segmentation accuracy☆36Updated 10 months ago
- A tool for cell instance aware segmentation in densely packed 3D volumetric images☆90Updated this week
- Image-translation-assisted segmentation in 3D☆24Updated 2 years ago
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆211Updated 3 months ago
- ☆20Updated 2 years ago
- Cloud-based data annotation tools for biological images☆73Updated 7 months ago