Alternatives and similar repositories for jupyter-workflow:

Users that are interested in jupyter-workflow are comparing it to the libraries listed below

• alpha-unito / streamflow
  StreamFlow Workflow Manager
  ☆56Updated this week
• NCI-GDC / psqlgraph
  Library for graph-like storage in postgresql using sqlalchemy
  ☆22Updated last week
• biolab / orange-bio
  ☆9Updated 7 years ago
• phnmnl / phenomenal-h2020
  Documentation and wiki for the PhenoMeNal H2020 E-Infrastructure Project
  ☆22Updated 3 weeks ago
• common-workflow-language / cwl-website
  www.commonwl.org
  ☆10Updated last month
• singularityware / singularityware.github.io
  base documentation site for Singularity software
  ☆27Updated 3 years ago
• common-workflow-language / cwl-v1.2
  Released CWL v1.2.1 specification
  ☆36Updated last month
• mamba-org / rhumba
  The R package manager that is blazingly fast ⚡. Powered by mamba.
  ☆75Updated 2 years ago
• MaayanLab / appyter
  jinja2-enabled jupyter notebooks
  ☆37Updated this week
• rabix / benten
  A language server for Common Workflow Language
  ☆65Updated last year
• common-workflow-language / user_guide
  The CWL v1.0 - v1.2 user guide
  ☆42Updated 6 months ago
• RUBi-ZA / JMS
  A workflow management system and web-based cluster front-end for high performance computing
  ☆20Updated 2 years ago
• marcbux / Hi-WAY
  Heterogeneity-incorporating Workflow ApplicationMaster for YARN
  ☆26Updated 7 years ago
• NIH-HPC / singularity-examples
  example singularity definition files and demos
  ☆27Updated 6 years ago
• broadinstitute / gene-hints
  Discoverability for gene search
  ☆12Updated 2 years ago
• broadinstitute / taiga
  Taiga for Dataset management
  ☆12Updated last year
• sylabs / sif
  Singularity Image Format (SIF) reference implementation.
  ☆19Updated 2 weeks ago
• BD2KGenomics / cgcloud
  Image and VM management for Jenkins, Spark and Mesos clusters in EC2
  ☆22Updated 4 years ago
• abs-tudelft / ArrowSAM
  Genomics datastructures using Apache Arrow
  ☆21Updated 4 years ago
• wfcommons / WfCommons
  WfCommons: A Framework for Enabling Scientific Workflow Research and Development
  ☆32Updated this week
• wheretrue / fasql
  DuckDB Extension for reading and writing FASTA and FASTQ Files
  ☆21Updated last year
• vsoch / scif
  scientific filesystem: a filesystem organization for scientific software and metadata
  ☆34Updated last year
• molpopgen / BigDataFormats
  Tutorial on programming or "big data"/bioinformatics
  ☆32Updated 7 years ago
• BioInterchange / Ontologies
  Home of the Genomic Feature and Variation Ontology (GFVO)
  ☆16Updated 4 years ago
• nextstrain / cli
  The Nextstrain command-line interface (CLI)—a program called nextstrain—which aims to provide a consistent way to run and visualize patho…
  ☆27Updated last week
• NCEAS / metacatui
  MetacatUI: A client-side web interface for DataONE data repositories
  ☆43Updated this week
• common-workflow-library / cwl-patterns
  Patterns commonly encountered when writing CWL workflows
  ☆26Updated 3 years ago
• ga4gh-discovery / data-connect
  Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.
  ☆24Updated last year
• rnabioco / practical-data-analysis
  Short course using RStudio for biological data analysis
  ☆14Updated 2 years ago
• ycrc / dSQ
  dead Simple Queue - Slurm arrays for files with jobs in them.
  ☆24Updated 2 years ago