Alternatives and similar repositories for workbench:

Users that are interested in workbench are comparing it to the libraries listed below

• OHDSI / Genomic-CDM
  Repository for development of the genomic module of the CDM.
  ☆19Updated 5 years ago
• elimuinformatics / vcf2fhir
  vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration
  ☆37Updated 4 months ago
• HL7 / genomics-reporting
  Source for the HL7 Genomics work group's "Clinical Genomics-Reporting" FHIR implementation guide
  ☆20Updated last month
• monarch-initiative / phenol
  phenol: Phenotype ontology library
  ☆23Updated 6 months ago
• DataBiosphere / terra-ui
  Web user interface for the Terra platform
  ☆53Updated this week
• monarch-initiative / loinc2hpo
  Java library to map LOINC-encoded test results to Human Phenotype Ontology
  ☆30Updated last year
• ga4gh / pedigree
  Repository for the family history/pedigree project
  ☆11Updated last year
• all-of-us / data-browser
  All of Us public data browser.
  ☆13Updated last week
• Consonance / consonance
  Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows
  ☆14Updated 6 years ago
• uc-cdis / gen3sdk-python
  Gen3 SDK for Python
  ☆14Updated last week
• NIH-NCPI / fhir-101
  🔥 FHIR 101 - A Practical Guide
  ☆38Updated 4 years ago
• TheJacksonLaboratory / hpo-web
  a web application to search and navigate the Human Phenotype Ontology (HPO)
  ☆13Updated last week
• ga4gh / data-repository-service-schemas
  A repository for the schemas used for the Data Repository Service.
  ☆60Updated 2 months ago
• monarch-initiative / monarch-disease-ontology-RETIRED
  THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
  ☆17Updated 3 years ago
• transmart / transmartApp
  tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlati…
  ☆71Updated 6 years ago
• phenopackets / phenopacket-schema
  Repository for the GA4GH phenopacket schema
  ☆80Updated 4 months ago
• CNAG-Biomedical-Informatics / convert-pheno
  A software toolkit for the interconversion of standard data models for phenotypic data
  ☆11Updated this week
• imsweb / naaccr-xml
  This Java library provides support for the NAACCR XML format.
  ☆13Updated this week
• CDMFORUM / CDM-GUIDANCE
  The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…
  ☆30Updated 4 years ago
• ga4gh-discovery / data-connect
  Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.
  ☆24Updated last year
• hms-dbmi / hail-on-AWS-spot-instances
  An option to spin cost effective EMR clusters in AWS with Hail and JupyterNotebook installed
  ☆16Updated 4 years ago
• TheJacksonLaboratory / loinc2hpoAnnotation
  loinc2hpo Annotation Data
  ☆24Updated 2 years ago
• EBISPOT / goci
  GWAS Catalog Ontology and Curation Infrastructure
  ☆26Updated this week
• cBioPortal / oncotree
  ☆41Updated this week
• DataBiosphere / job-manager
  Job Manager API and UI for interacting with asynchronous batch jobs and workflows.
  ☆26Updated last week
• NCI-GDC / gdcdictionary
  Data dictionary for the GDC
  ☆50Updated 4 months ago
• argonautproject / subscriptions
  Clinical Data Subscriptions: Develop FHIR Subscriptions resource to push updates of medical record information to authorized recipients …
  ☆13Updated 2 years ago
• cancervariants / metakb
  Central repository for the VICC metakb web application
  ☆15Updated last week
• OHDSI / Athena
  Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
  ☆60Updated 3 months ago
• genome-nexus / genome-nexus
  Backend server for Genome Nexus
  ☆41Updated this week