adamaltmejd / covidView external linksLinks
☆88Apr 24, 2024Updated last year
Alternatives and similar repositories for covid
Users that are interested in covid are comparing it to the libraries listed below
Sorting:
- COVID-19 data modelling project☆13Apr 24, 2020Updated 5 years ago
- Population-wide Testing, Tracing and Isolation Models☆15Jan 14, 2021Updated 5 years ago
- ☆15Aug 18, 2021Updated 4 years ago
- Tools for generalized quantile modeling☆15Sep 28, 2022Updated 3 years ago
- Compute and visualise incidence (reworking of the original incidence package)☆17Nov 28, 2025Updated 2 months ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17May 9, 2024Updated last year
- Monte-Carlo State Space Models☆19Jul 1, 2024Updated last year
- Interfacing several COVID-19 related datasets☆45May 22, 2022Updated 3 years ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Nov 10, 2023Updated 2 years ago
- A collection of datasets from Skolverket☆11Sep 1, 2020Updated 5 years ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆17Dec 7, 2023Updated 2 years ago
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆11May 4, 2021Updated 4 years ago
- R app for daily Covid-19 Re estimates☆18Oct 12, 2022Updated 3 years ago
- A Bayesian model for time-series count data with weekend effects and a lagged reporting process☆10Mar 7, 2022Updated 3 years ago
- Excess deaths due to COVID-19 pandemic in 2020☆11Jan 27, 2022Updated 4 years ago
- Web dashboard to visualize COVID-19 serosurveillance efforts☆12Nov 17, 2025Updated 2 months ago
- Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"☆11Jul 23, 2022Updated 3 years ago
- Fast and lightweight R6 parameter interface☆12Aug 28, 2022Updated 3 years ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Sep 10, 2024Updated last year
- Methods for estimating joint distributions assisted with survey data☆12May 16, 2023Updated 2 years ago
- Graduate-level course: "Practical Inference for Researchers in the Physical Sciences"☆14Dec 2, 2021Updated 4 years ago
- R-package with Algorithms and Tools for Tabular Statistics and Hierarchical Computations☆11Dec 5, 2025Updated 2 months ago
- A platform-agnostic, configurable, and brandable SPARQL editor and visualization interface.☆15Nov 6, 2025Updated 3 months ago
- Joint estimation of sentiment and topics in textual data☆14Aug 9, 2023Updated 2 years ago
- Points of Significance: Modeling infectious epidemics☆12Oct 31, 2024Updated last year
- workflowr project for exploring the 2016 Divvy trip data.☆15Jul 14, 2020Updated 5 years ago
- Grouped dates in R☆20Dec 19, 2025Updated last month
- An R package implementing an idiosyncratic Stan workflow☆15Aug 18, 2022Updated 3 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 4 months ago
- R-package for interpretable nonparametric modeling of longitudinal data using additive Gaussian processes. Contains functionality for in…☆26Oct 30, 2025Updated 3 months ago
- An R package for Bayes Linear emulation and history matching.☆18Dec 1, 2025Updated 2 months ago
- My notes on Bayesian statistics in Stan, etc (2018-)☆14Nov 14, 2020Updated 5 years ago
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 3 years ago
- Enable per-page code-folding for Bookdown and Distill☆16Nov 1, 2019Updated 6 years ago
- Swedish data☆13Dec 10, 2025Updated 2 months ago
- Supporting materials for Nishiura et al "Serial interval of novel coronavirus (COVID-19) infections" International journal of infectious …☆14Jun 2, 2020Updated 5 years ago
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆16Jul 11, 2019Updated 6 years ago
- R Package 📦 for using the HaveIBeenPwned.com API☆13Oct 10, 2022Updated 3 years ago