☆18Apr 4, 2026Updated 3 months ago
Alternatives and similar repositories for PepBenchmark
Users that are interested in PepBenchmark are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for reproducing paper describing methods for representing peptides☆17Updated this week
- Comprehensive Benchmark for Protein-Peptide Complex Structure Prediction with AlphaFold3☆19Sep 4, 2025Updated 10 months ago
- ☆19Sep 5, 2024Updated last year
- List of papers about Peptide research using Deep Learning☆44Jun 16, 2026Updated last month
- Heuristic energy-based cyclic peptide design☆15Feb 21, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code for GP-MoLFormer + pair-tuning☆17Sep 18, 2025Updated 10 months ago
- pepADMET: a novel computational platform for systematic ADMET evaluation of peptides☆25Oct 21, 2025Updated 9 months ago
- [TMLR 2025] Stability-Aware Training of Machine Learning Force Fields with Differentiable Boltzmann Estimators☆17Nov 20, 2025Updated 8 months ago
- Introduction to cyclic peptide simulations and our group's protocols.☆18Sep 21, 2023Updated 2 years ago
- Benchmarking and validation of Machine Learning Interatomic Potentials (MLIP)☆15Updated this week
- Coarse-grained and Multi-dimensional Data-driven molecular generation (CMD-GEN). This framework bridges three-dimensional ligand-protein …☆17Sep 13, 2025Updated 10 months ago
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆32May 10, 2025Updated last year
- Augmenting Polymer Datasets via Iterative Rearrangement☆13Jun 30, 2023Updated 3 years ago
- Codebase for Paper: Benchmarking Real-World Applicability of Molecular Generative Models from De novo Design to Lead Optimization with Mo…☆32May 18, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆86Jan 23, 2026Updated 5 months ago
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆34Jun 22, 2026Updated 3 weeks ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆128Apr 16, 2025Updated last year
- molecule design for fluorescence☆12Nov 22, 2021Updated 4 years ago
- A geometric deep learning model for predicting molecular tensorial properties and selected spectra with high accurately and efficiency☆14Nov 10, 2024Updated last year
- A benchmark dataset for protein-ligand co-folding prediction☆80Aug 13, 2025Updated 11 months ago
- Grid Generation☆11Mar 7, 2024Updated 2 years ago
- Transfer Learning-enabled context-aware microbial source tracking☆16Oct 4, 2022Updated 3 years ago
- Molecule Generative Graph Neural Networks☆14Oct 27, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 小模型LLM的搭建,学习LLM的建模、训练过程 基于DeepSeek-MOE架构的小模型,用于个人学习,从0开始,解释每一条语句☆15Mar 28, 2025Updated last year
- Cyclic-peptide - protein complexes benchmark and associated scripts and data☆16Aug 31, 2024Updated last year
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆57Sep 1, 2025Updated 10 months ago
- ☆14Mar 31, 2026Updated 3 months ago
- Structural Quality Assessment for Biomolecular Structure Prediction Models☆97May 22, 2026Updated last month
- Next generation machine learning force field on enzymatic catalysis☆17Updated this week
- ☆11Mar 28, 2024Updated 2 years ago
- Official repository for the paper “MDAgent2: Large Language Model for Code Generation and Knowledge Reasoning in Molecular Dynamics”.☆16Updated this week
- Amber MD agent tooling and MCP servers☆15Jun 16, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ICLR 2026 AI-aided Drug Discovery Paper Selection☆17Jan 30, 2026Updated 5 months ago
- ☆18Feb 19, 2021Updated 5 years ago
- ☆42Jul 8, 2023Updated 3 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- ☆11May 25, 2026Updated last month
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆14Feb 11, 2026Updated 5 months ago
- App for serotonergic targets☆12Jan 8, 2026Updated 6 months ago