LyonsLab / PhytoOracleLinks
Distributive pipelines for phenomic data analysis
☆13Updated 4 years ago
Alternatives and similar repositories for PhytoOracle
Users that are interested in PhytoOracle are comparing it to the libraries listed below
Sorting:
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 5 years ago
- Data portal client and server for NMDC.☆12Updated this week
- ☆93Updated 2 months ago
- A place to put docker build files☆13Updated 2 years ago
- The WES API is a standard way to run and manage portable workflows.☆87Updated last month
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated last year
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆77Updated last month
- Efficient variant-call data storage and retrieval library using the TileDB storage library.☆103Updated this week
- Bioinformatics curated workflows that use Biocontainers tools☆19Updated 6 years ago
- Build and test new apps for the KBase platform☆28Updated 11 months ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- Python utilities for CWL☆42Updated 2 weeks ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆36Updated 8 months ago
- Workflow Description Language developer tools & local runner☆200Updated this week
- WDL plugin for pytest☆49Updated 2 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Updated 2 weeks ago
- deploy a snakemake pipeline directly from version control (under development)☆24Updated 3 weeks ago
- Utilities for building and managing bioconda recipes☆103Updated 3 weeks ago
- Fast, whole-genome simulation of the discrete time Wright-Fisher process☆15Updated 5 years ago
- Monitor computational workflows in real time☆74Updated last year
- non-redundant, compressed, journalled, file-based storage for biological sequences☆47Updated 2 months ago
- Tutorial with snakemake and Scientific Filesystem☆16Updated 5 years ago
- Accumulating container resource usage with workflow metadata☆19Updated 4 years ago
- Python Scientific Pipeline Management System☆71Updated 2 years ago
- NGS Language Bindings☆120Updated 2 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆38Updated 2 weeks ago
- Handy command line utility for Galaxy administrators☆24Updated 4 months ago
- A translator from WDL to CWL v1.2☆27Updated 2 weeks ago
- Nextflow Tower system☆152Updated last year