A curated list of resources for "Flow Matching Meets Biology and Life Science: A Survey". Nature Portfolio Journal Artificial Intelligence. https://www.nature.com/articles/s44387-025-00066-y
☆91Mar 7, 2026Updated 5 months ago
Alternatives and similar repositories for Awesome-Flow-Matching-Meets-Biology
Users that are interested in Awesome-Flow-Matching-Meets-Biology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [ICLR 2026 Oral] Evaluating and Enhancing Multimodal Agentic Search with Structured Long Reasoning Chains☆38Apr 11, 2026Updated 4 months ago
- [ACL 2026] RAG over Tables: Hierarchical Memory Index, Multi-Stage Retrieval, and Benchmarking.☆32Oct 7, 2025Updated 10 months ago
- [ACL'25 Main] SelfElicit: Your Language Model Secretly Knows Where is the Relevant Evidence! | 让你的LLM更好地利用上下文文档：一个基于注意力的简单方案☆28Feb 17, 2025Updated last year
- ☆79Jul 24, 2026Updated 2 weeks ago
- CoFiRec: Coarse-to-Fine Tokenization for Generative Recommendationn☆21Jan 23, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆24Sep 30, 2024Updated last year
- COVID-19 Infodemic Twitter dataset☆13Sep 5, 2021Updated 4 years ago
- A curated list of papers and resources based on the survey "Code as Agent Harness"☆631May 20, 2026Updated 2 months ago
- An implementation of the Equivariant Graph Neural Network (EGNN) layer type for DGL-PyTorch.☆15Dec 27, 2022Updated 3 years ago
- ☆15Jun 27, 2025Updated last year
- BackTime: Backdoor Attacks on Multivariate Time Series Forecasting☆32Apr 14, 2025Updated last year
- TACO: TFBS-Aware Cis-Regulatory Element Optimization☆23Aug 1, 2025Updated last year
- [NeurIPS 2025 Spotlight] Transformer Copilot: Learning from The Mistake Log in LLM Fine-tuning☆21Nov 14, 2025Updated 8 months ago
- A curated list of papers and resources about multimodal learning on graphs.☆46Feb 28, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆27May 16, 2026Updated 2 months ago
- Local Motif Clustering on Time-Evolving Graphs, KDD 2020☆10Mar 12, 2025Updated last year
- ☆18Oct 29, 2025Updated 9 months ago
- KGANCDA is effective to predict associations between circRNA and cancer, which is based on knowledge graph attention network. The detail …☆13Dec 12, 2022Updated 3 years ago
- [𝗜𝗖𝗠𝗟 𝟮𝟬𝟮𝟲] Dispersion loss counteracts embedding condensation and improves generalization in small language models☆19May 21, 2026Updated 2 months ago
- Awesome papers related to generative flow matching and its applications in bioinformatics. (Nature Machine Intelligence)☆47Apr 24, 2026Updated 3 months ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆64Aug 2, 2024Updated 2 years ago
- The official source code for "Class Label-aware Graph Anomaly Detection", accepted at CIKM 2023.☆19Aug 28, 2023Updated 2 years ago
- Functional and Learnable Cell dynamicS☆21May 13, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- [ICML 2024] Code for Pairwise Alignment Improves Graph Domain Adaptation (Pair-Align)☆14Jun 15, 2024Updated 2 years ago
- Code for "Learning Deep Network Representations with Adversarially Regularized Autoencoders."☆17Dec 26, 2019Updated 6 years ago
- ☆23Apr 30, 2025Updated last year
- DPPIN: A Biological Repository of Dynamic Protein-Protein Interaction Network Data, IEEE BigData 2022☆33Feb 13, 2023Updated 3 years ago
- Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching, ICML2025 (Spotlight)☆36Aug 11, 2025Updated 11 months ago
- A foundation model framework for analyzing multiplexed tissue imaging data across molecular, cellular and tissue scales enabling clinical…☆91Updated this week
- [NeurIPS 2023] Adaptive Test-Time Personalization for Federated Learning. Wenxuan Bao, Tianxin Wei, Haohan Wang, Jingrui He.☆26Dec 25, 2023Updated 2 years ago
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆77Mar 27, 2025Updated last year
- ☆15Feb 18, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- [ICML'26 Spotlight] What is the right loss function for LLM supervised finetuning?☆67May 28, 2026Updated 2 months ago
- [ICML 2023] Optimizing the Collaboration Structure in Cross-Silo Federated Learning. Wenxuan Bao, Haohan Wang, Jun Wu, Jingrui He.☆21Jul 25, 2023Updated 3 years ago
- Code for humanization of antibody and nanobody☆92Aug 28, 2025Updated 11 months ago
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆55Jul 22, 2025Updated last year
- ☆33Aug 3, 2026Updated last week
- A framework for training energy-based diffusion models for sampling and energy estimation.☆108May 10, 2026Updated 3 months ago
- Mixed continous/categorical flow-matching model for de novo molecule generation.☆214Apr 26, 2026Updated 3 months ago