RNA-FRETools / fretraj
PyMOL plugin to calculate accessible contact volumes on PDB structures
☆9Updated 2 months ago
Alternatives and similar repositories for fretraj
Users that are interested in fretraj are comparing it to the libraries listed below
Sorting:
- An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM☆36Updated 9 months ago
- Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over pop…☆57Updated 2 months ago
- ☆39Updated last week
- Analysis of non-covalent interactions in MD trajectories☆56Updated 4 months ago
- Software for the prediction of FRET data from conformational ensembles.☆23Updated 4 months ago
- ☆18Updated 3 years ago
- qFit: Automated and unbiased multi-conformer models from X-ray and EM maps.☆41Updated 2 weeks ago
- FreeSASA Python Module☆54Updated last year
- PyMOL-wasm port's binary and html/javascript code☆24Updated last year
- The pDynamo molecular modeling and simulation program☆37Updated 2 weeks ago
- Pras Server is a library to repair PDB or mmCIF structures, add missing heavy atoms and hydrogen atoms and assign secondary structure by …☆27Updated 10 months ago
- Input files for GROMACS tutorials written for the Journal of Physical Chemistry B☆19Updated 9 months ago
- ☆59Updated last week
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- ☆31Updated 7 months ago
- A python module to plot secondary structure schemes☆25Updated last year
- Weighted Ensemble Data Analysis and Plotting☆24Updated 8 months ago
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆42Updated last year
- Python Tools for NAMD☆21Updated last week
- pyKVFinder: Python-C parallel KVFinder☆25Updated 3 weeks ago
- ☆16Updated last month
- Software for the prediction of DEER and PRE data from conformational ensembles.☆12Updated last week
- Collection of Python scripts to setup and run simulations with OpenMM☆17Updated 4 years ago
- Functions to scrape GPCR data from the web.☆16Updated 3 years ago
- mdml: Deep Learning for Molecular Simulations☆29Updated this week
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆18Updated last year
- ☆54Updated 2 years ago
- Source code for HOLE program.☆35Updated 9 months ago
- ☆38Updated last month
- ASGARD is a tool that allows via an automated MD workflow to perform MD protein or protein-ligand complex analysis and to generate the co…☆17Updated 10 months ago