Alternatives and similar repositories for VTX

Users that are interested in VTX are comparing it to the libraries listed below

• KULL-Centre / CALVADOS
  ☆64Updated this week
• maccallumlab / martini_openmm
  ☆54Updated 2 years ago
• MiaoLab20 / gamd-openmm
  Gaussian Accelerated Molecular Dynamics (GaMD) is a computational method for both unconstrained enhanced sampling and free energy calcula…
  ☆81Updated last month
• tdudgeon / simple-simulate-complex
  Simple protein-ligand complex simulation with OpenMM
  ☆85Updated last year
• ChemBioHTP / EnzyHTP
  EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling
  ☆25Updated last week
• openmm / openmm_workshops
  ☆35Updated 9 months ago
• BrooksResearchGroup-UM / pyCHARMM-Workshop
  pyCHARMM tutorial, documentation and examples. This repository contains materials originally from the pyCHARMM Workshop run at the Univer…
  ☆69Updated 4 months ago
• log-md / logmd
  ☆58Updated last month
• aethertier / secstructartist
  A python module to plot secondary structure schemes
  ☆25Updated last year
• fmaschietto / mdigest
  ☆31Updated 7 months ago
• tiwarylab / alphafold2rave
  ☆68Updated 11 months ago
• bioexcel / biobb
  Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over pop…
  ☆58Updated 2 months ago
• paulrobustelli / Force-Fields
  Force Fields
  ☆62Updated 4 months ago
• maxscheurer / pycontact
  Analysis of non-covalent interactions in MD trajectories
  ☆57Updated 5 months ago
• tiwarylab / af2rave
  Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2
  ☆47Updated 3 weeks ago
• YAMACS-SML / YAMACS
  Yasara plugins for Gromacs users
  ☆27Updated last year
• Lemkul-Lab / gmx_tutorials_jpcb
  Input files for GROMACS tutorials written for the Journal of Physical Chemistry B
  ☆19Updated 10 months ago
• KULL-Centre / _2024_Cao_CALVADOSCOM
  ☆16Updated last month
• sulfierry / free_energy_landscape
  The Free Energy Landscape Analysis tool offers a comprehensive suite for analyzing and visualizing the free energy landscape derived from…
  ☆21Updated 3 months ago
• ci-lab-cz / streamd
  Fully automated high-throughput MD pipeline
  ☆60Updated 3 weeks ago
• mqcomplab / MDANCE
  MDANCE is a flexible n-ary clustering package for all applications.
  ☆61Updated 2 weeks ago
• PDBeurope / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆95Updated 9 months ago
• intbio / gromacs_ff
  Trusted force field files for gromacs
  ☆50Updated 7 months ago
• wells-wood-research / drMD
  Molecular Dynamics for Experimentalists
  ☆57Updated this week
• wlsong / PyLipID
  A python toolkit for analysing membrane protein-lipid interactions.
  ☆63Updated 2 years ago
• pstansfeld / MemProtMD
  ☆40Updated 3 weeks ago
• MDAnalysis / WorkshopMDMLEdinburgh2022
  ☆65Updated last year
• Gervasiolab / OpenBPMD
  ☆65Updated last year
• openmm / openmm-setup
  An application for configuring and running simulations with OpenMM
  ☆69Updated 6 months ago
• Gallicchio-Lab / openmm-atmmetaforce-plugin
  An OpenMM plugin that implements the Alchemical Transfer Potential
  ☆40Updated 2 years ago