Dataset package for facile training and testing of machine learning/AI algorithms that predict drug response in cancer model systems.
☆21May 29, 2026Updated last week
Alternatives and similar repositories for coderdata
Users that are interested in coderdata are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.☆16Jan 15, 2024Updated 2 years ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆20Jun 1, 2023Updated 3 years ago
- Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning☆14Apr 24, 2024Updated 2 years ago
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆28Sep 17, 2025Updated 8 months ago
- PyTorch Implementation of CLEAN-Contact: Contrastive Learning-enabled Enzyme Functional Annotation Prediction with Structural Inference☆11May 29, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Leaf scale radiative transfer model based on spectral invariant properties - Matlab code☆13Nov 5, 2020Updated 5 years ago
- Calculates both scaffold and contig statistics (N50, L50, etc.) from a scaffold FASTA file.☆14Sep 29, 2020Updated 5 years ago
- ☆15Nov 23, 2023Updated 2 years ago
- cryo_fit1 source codes, test files, live at .../phenix-xxxx/modules☆10Mar 25, 2022Updated 4 years ago
- Course page for comp790-166 computational biology in spring 2022☆11Apr 25, 2022Updated 4 years ago
- Implementation of deep random forests. Also contains random subspace forests and X-of-N forests.☆11Dec 20, 2022Updated 3 years ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆14Jan 27, 2023Updated 3 years ago
- Learning materials for the 3000788 Introduction to Computational Molecular Biology course☆23Nov 19, 2025Updated 6 months ago
- Model translation framework☆16Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Quantitative NMR analysis through least-squares fit of spectroscopy data☆12Jan 29, 2020Updated 6 years ago
- Docker image for the DeepBind method.☆16Nov 7, 2015Updated 10 years ago
- ☆20Aug 28, 2022Updated 3 years ago
- Numerical interpolation in N-dimensions over rectilinear grids☆17Feb 19, 2026Updated 3 months ago
- Snakemake-based amplicon processing protocol for 16S and ITS sequences.☆13Mar 18, 2024Updated 2 years ago
- Given a global mean temperature pathway, generate random global climate fields consistent with it and with spatial and temporal correlati…☆14Oct 8, 2020Updated 5 years ago
- This contains all the files and scripts necessary to participate in the FTICR-MS data analysis demonstration at the SBR SFA Community Wor…☆18Jul 8, 2020Updated 5 years ago
- The Capacity Expansion Regional Feasibility (CERF) model☆16Jan 24, 2025Updated last year
- ☆19May 5, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Pipeline to apply encoded Kmer analysis to protein sequences☆16May 15, 2026Updated 3 weeks ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Apr 25, 2023Updated 3 years ago
- ☆17Feb 5, 2026Updated 4 months ago
- ☆24Apr 15, 2024Updated 2 years ago
- This repository includes source codes for the DRM and 2-layer DRM (2L-DRM) models.☆16Jul 9, 2021Updated 4 years ago
- FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.☆13Nov 5, 2025Updated 7 months ago
- A single point of access meta-repository that guides others in how to reproduce an experiment☆17May 19, 2026Updated 3 weeks ago
- Advanced Lake Biogeochemistry Model☆24Updated this week
- Containerized cancer subtype prediction tools for gene expression, miRNA, DNA methylation, somatic mutations and copy number variation.☆36Apr 9, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Layered enrichment analysis tool enables facile enrichment using various statistics at once.☆19Mar 11, 2026Updated 3 months ago
- Record and playback a terminal session☆15Feb 4, 2013Updated 13 years ago
- Data Standards Hackathon for NGS based typing.☆14May 20, 2026Updated 3 weeks ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Sep 16, 2021Updated 4 years ago
- Web Component wrapper for Twitter's button using Polymer☆30Jun 5, 2015Updated 11 years ago
- Framework for running bioinformatic workflows and pipelines using the Google Pipelines API as the underlying task-runner.☆12Mar 22, 2017Updated 9 years ago