AdaptInfer / context-reviewLinks
☆13Updated last week
Alternatives and similar repositories for context-review
Users that are interested in context-review are comparing it to the libraries listed below
Sorting:
- An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.☆75Updated this week
- Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)☆72Updated last year
- Learning to Split for Automatic Bias Detection☆48Updated 2 years ago
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆122Updated 9 months ago
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆115Updated last month
- Benchmarks for classification of genomic sequences☆150Updated last week
- Personalized Regression☆17Updated 5 years ago
- Pretraining infrastructure for multi-hybrid AI model architectures☆180Updated 3 weeks ago
- ☆26Updated 2 years ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell lev…☆180Updated last year
- GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics☆132Updated 11 months ago
- Supervised Training of Conditional Monge Maps☆18Updated last year
- Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena☆705Updated 3 months ago
- Dirichlet Diffusion Score Model for Biological Sequence Generation.☆55Updated 5 months ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆48Updated last year
- Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors☆40Updated last year
- 🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨☆408Updated 3 weeks ago
- ☆33Updated 2 years ago
- Bi-Directional Equivariant Long-Range DNA Sequence Modeling☆200Updated last month
- Language modeling of viral evolution☆144Updated 2 years ago
- Official code repository of "BERTology Meets Biology: Interpreting Attention in Protein Language Models."☆301Updated 3 months ago
- LC-PLM: long-context protein language model based on BiMamba-S architecture☆21Updated 7 months ago
- Paper collection for single cell foundation models☆31Updated last year
- A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.☆245Updated 2 months ago
- pyrelational is a python active learning library for rapidly implementing active learning pipelines from data management, model developme…☆155Updated 6 months ago
- Code and dataset for SNP2Vec paper☆21Updated 2 years ago
- Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks☆28Updated 2 months ago
- Retrieved Sequence Augmentation for Protein Representation Learning☆53Updated last year
- Code for CELL-E: Biological Zero-Shot Text-to-Image Synthesis for Protein Localization Prediction☆29Updated last year
- [COLM 2024] Large Language Models as Biomedical Hypothesis Generators: A Comprehensive Evaluation☆14Updated last year