Alternatives and similar repositories for opentrons-integration-tools:

Users that are interested in opentrons-integration-tools are comparing it to the libraries listed below

• pachterlab / colosseum
  colosseum system - open source fraction collector for laboratories
  ☆25Updated 2 years ago
• cytomining / pycytominer
  Python package for processing image-based profiling data
  ☆104Updated 2 weeks ago
• scverse / pytometry
  Flow & mass cytometry analytics.
  ☆46Updated this week
• kalekundert / wellmap
  File format for 96-well plate layouts.
  ☆23Updated last year
• Bioprotocols / labop
  Laboratory Open Protocol (LabOP) Language
  ☆41Updated 5 months ago
• scverse / spatialdata-io
  ☆55Updated this week
• lakigigar / bioRxiv-diff
  ☆12Updated 6 months ago
• tlambert03 / FPbase
  The Fluorescent Protein Database
  ☆66Updated this week
• MannLabs / scPortrait
  scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images
  ☆42Updated this week
• broadinstitute / imaging-platform-pipelines
  Cell Painting and other pipelines from the Imaging Platform
  ☆17Updated 2 months ago
• benchling / integration-examples
  Example usage of the Benchling API: https://docs.benchling.com/
  ☆32Updated last year
• scverse / napari-spatialdata
  Interactive visualization of spatial omics data
  ☆52Updated last week
• DistributedScience / Distributed-CellProfiler
  Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.
  ☆41Updated last month
• whitews / FlowIO
  A Python library for reading and writing Flow Cytometry Standard (FCS) files
  ☆45Updated last week
• taborlab / FlowCal
  Python Flow Cytometry Calibration Library
  ☆50Updated 8 months ago
• cubimedrub / macworp
  Online platform to host your (Nextflow, Snakemake, ...) workflows with integrated result rendering.
  ☆17Updated this week
• scverse / spatialdata-notebooks
  ☆49Updated last week
• reactome / reactome2py
  python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
  ☆28Updated last year
• dcjones / proseg
  Probabilistic cell segmentation for in situ spatial transcriptomics
  ☆67Updated last week
• alubbock / thunor
  Dose response curves and DIP rates for cell proliferation data in Python
  ☆14Updated 6 months ago
• HenriquesLab / NanoJ-Fluidics
  Manual, source-code and binaries for the NanoJ-Fluidics project
  ☆50Updated 2 years ago
• brianchowlab / OSP
  An Open-source Plate Reader
  ☆28Updated 5 years ago
• wikipathways / pywikipathways
  Python Client Package for WikiPathways
  ☆20Updated 3 weeks ago
• SBRG / pymodulon
  Python package for analyzing and visualizing iModulons
  ☆13Updated 3 weeks ago
• Hatchin / FlowSOM
  FlowSOM algorithm in Python, using self-organizing maps and minimum spanning tree for visualization and interpretation of cytometry data
  ☆32Updated 2 years ago
• Jhsmit / ColiCoords
  Single-cell fluorescence microscopy data analysis
  ☆26Updated 3 years ago
• broadinstitute / cell-health
  Predicting Cell Health with Morphological Profiles
  ☆36Updated 3 years ago
• vitessce / vitessce-python
  Python API and Jupyter widget for Vitessce
  ☆44Updated last month
• carpenter-singh-lab / 2022_Haghighi_NatureMethods
  High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations
  ☆48Updated 2 months ago
• saezlab / lipyd
  Python module for lipidomics LC MS/MS data analysis
  ☆15Updated 9 months ago