BioMedBERT / biomedbertLinks
BioMedBERT: A Pre-trained Biomedical Language Model for QA and IR
☆30Updated 4 years ago
Alternatives and similar repositories for biomedbert
Users that are interested in biomedbert are comparing it to the libraries listed below
Sorting:
- ☆25Updated last year
- Bioformer: an efficient BERT model for biomedical text mining☆55Updated 2 years ago
- ☆49Updated 3 years ago
- [ISMB 2024] Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models☆64Updated last year
- Multimodal Transformers for biomedical text and Knowledge Graph data☆35Updated 2 years ago
- PMC-Patients☆101Updated last year
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆195Updated last year
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- "Knowledge Graph-based Question Answering with Electronic Health Records", accepted at Machine Learning for Health Care (MLHC) 2021☆36Updated last year
- EMNLP'22 | PromptEHR: Conditional Electronic Healthcare Records Generation with Prompt Learning☆29Updated 2 years ago
- DescEmb - Unifying Heterogenous Electronic Health Records Systems via Text-Based Code Embedding☆21Updated 4 months ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- Biomedical Entity Linking Benchmark☆14Updated 9 months ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆69Updated last year
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆201Updated 2 years ago
- ☆19Updated 3 years ago
- A repo for REMOD: relation extraction algorithm based on multimodality knowledge distillation☆28Updated 3 years ago
- Codes for the EMNLP'2020 paper "Predicting Clinical Trial Results by Implicit Evidence Integration".☆14Updated 4 years ago
- Implements ChatGPT API via request package.☆46Updated 2 years ago
- Using pretrained language models for biomedical knowledge graph completion.☆47Updated 3 years ago
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆32Updated 2 years ago
- AIONER☆60Updated last year
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆20Updated 2 years ago
- [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"☆34Updated 8 months ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- ☆22Updated 3 years ago
- MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023☆50Updated 2 years ago
- Repository for student projects within biomedical text mining from Lund University☆55Updated 2 years ago