AIM-Harvard / TotalSegmentator-to-nnUNet-format-convertLinks
Convert the TotalSegmentator dataset into the nnUNet format
☆18Updated 2 years ago
Alternatives and similar repositories for TotalSegmentator-to-nnUNet-format-convert
Users that are interested in TotalSegmentator-to-nnUNet-format-convert are comparing it to the libraries listed below
Sorting:
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆51Updated 4 months ago
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆194Updated 2 months ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆79Updated this week
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆114Updated 11 months ago
- highest ranked algorithm of Learn2Reg requires little to no training and runs within seconds☆74Updated 3 weeks ago
- [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis☆87Updated 2 weeks ago
- Baseline methods, training scripts, and pretrained models for LUMIR challenge at Learn2Reg 2024☆29Updated 5 months ago
- A Deep Learning Workflow for the Automated Characterization of Cardiac Mechanics☆46Updated last year
- ☆27Updated 2 years ago
- Skeleton segmentation in CT images☆28Updated 9 months ago
- NeurIPS 2023 - Lung250M-4B: A Combined 3D Dataset for CT- and Point Cloud-Based Intra-Patient Lung Registration☆40Updated last year
- ☆118Updated 2 months ago
- ☆144Updated 3 months ago
- ☆15Updated 9 months ago
- XiaoweiXu / ImageCAS-A-Large-Scale-Dataset-and-Benchmark-for-Coronary-Artery-Segmentation-based-on-CT☆79Updated 2 years ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆118Updated 3 weeks ago
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆40Updated last year
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆81Updated last year
- SVoRT: Iterative Transformer for Slice-to-Volume Registration in Fetal Brain MRI☆43Updated 2 years ago
- Preprocessing scripts: from dicom to aligned nitfy for SynthRAD2023 Grand Challenge☆69Updated 2 years ago
- A library for performing image registration using deep learning, regularized by inverse consistency☆56Updated last month
- Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]☆69Updated 2 years ago
- The public brain 3D vessel datasets, include TubeTK and MIDAS.☆41Updated 4 years ago
- This is the official Pytorch implementation of "Unsupervised Deformable Image Registration with Absent Correspondences in Pre-operative a…☆45Updated 2 years ago
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling☆42Updated last year
- ☆42Updated 2 years ago
- MIRTK based SVR reconstruction☆62Updated 8 months ago
- MRISegmentator☆45Updated 3 months ago
- Knee MRI cartilage segmentation model used in 2019 IWOAI segmentation challenge☆21Updated 4 years ago
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Updated last year