Convert the TotalSegmentator dataset into the nnUNet format
☆19Aug 1, 2023Updated 3 years ago
Alternatives and similar repositories for TotalSegmentator-to-nnUNet-format-convert
Users that are interested in TotalSegmentator-to-nnUNet-format-convert are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Feb 12, 2025Updated last year
- This is the official repository for Fast-nnUNet, a new fast model inference framework based on the nnUNet framework implementation.☆24May 12, 2026Updated 3 months ago
- The labels for the open-source dataset used in the paper "Topology-Preserving Automatic Labeling of Coronary Arteries via Anatomy-aware C…☆10Jun 20, 2025Updated last year
- A multilabel lymph node segmentation dataset from contrast CT☆28Jul 29, 2025Updated last year
- All the code available to reproduce the paper "Deep Learning Surrogate of Computational Fluid Dynamics for Thrombus Formation Risk in the…☆13Nov 7, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 3DSlicer plugin for inpainting lung nodules in 3D chest CT data.☆11Dec 2, 2024Updated last year
- 3D dense segmentation compression codec based on crack codes.☆17Aug 1, 2026Updated 2 weeks ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆111Aug 10, 2026Updated last week
- Code for training and inference of a 3D CNN for whole-heart segmentation in CCTA☆14Mar 30, 2022Updated 4 years ago
- examples of using PyMIC for medical image computing with deep learning☆33Feb 23, 2026Updated 5 months ago
- This repository contains software tools developed/adopted by the Quantitative Imaging and Medical Physics (QIMP) team, Medical University…☆10Aug 2, 2024Updated 2 years ago
- 【MICCAI 2025 Oral】GLCP: Global-to-Local Connectivity Preservation for Tubular Structure Segmentation☆33Dec 15, 2025Updated 8 months ago
- The official repository to build SAT-DS, a medical data collection of over 72 public segmentation datasets, contains over 22K 3D images, …☆154Dec 3, 2025Updated 8 months ago
- Official GitHub repo for the article "A Public Cardiac CT Dataset Featuring the Left Atrial Appendage" published at the STACOM 2025 MICCA…☆24Oct 16, 2025Updated 10 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Pre-trained Diffusion Models for Plug-and-Play Medical Image Enhancement☆30Oct 3, 2023Updated 2 years ago
- Public release of Track-to-Learn: A general framework for tractography with deep reinforcement learning☆26Feb 4, 2026Updated 6 months ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆105Feb 24, 2026Updated 5 months ago
- Slicer3D extension for rating using Likert-type score Deep-learning generated segmentations, with segment editor functionality. Created t…☆28May 20, 2026Updated 2 months ago
- 1-day R workshop for experienced users. First session covers script writing, file names and overall project structures. The second sessio…☆13Jan 25, 2019Updated 7 years ago
- pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis☆62Nov 22, 2024Updated last year
- dMRI based fiber tracking using parallel transport tractography☆31May 18, 2026Updated 2 months ago
- ☆32Jun 7, 2025Updated last year
- Computational Environment for Radiological Research☆31Aug 7, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Jupyter Notebook vizualizing 10+ years of my body composition data☆12Jun 27, 2020Updated 6 years ago
- Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model☆272Jul 21, 2026Updated 3 weeks ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17May 8, 2025Updated last year
- A repository containing deep learning models and evaluation methods for enhancing medical image segmentation in Computed Tomography (CT) …☆23Jan 20, 2024Updated 2 years ago
- Stores the MHub models dockerfiles and scripts.☆11Apr 30, 2026Updated 3 months ago
- A thesis template compliant with King's College London and UCL rules☆19Dec 14, 2025Updated 8 months ago
- This repository is dedicated to my YouTube video where I add GitHub login through Laravel Socialite☆10Jan 18, 2023Updated 3 years ago
- This repository provides a 3D implementation of DINOv2 for self-supervised pretraining on volumetric (3D) medical images using Lightly, M…☆59Aug 5, 2026Updated last week
- ☆28Oct 30, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Run PHP Code Sniffer tests in Github Actions.☆11Feb 10, 2026Updated 6 months ago
- ☆11Jul 8, 2021Updated 5 years ago
- Zotero Citation intelligence — counts, networks, and one-click imports☆25Updated this week
- [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis☆98Jul 29, 2026Updated 2 weeks ago
- ☆51Aug 7, 2025Updated last year
- [IEEE TMI] Tumor synthesis leveraging medical reports.☆49Jan 26, 2026Updated 6 months ago
- Repo for code associated with Modeling the Mitral Valve.☆14Jul 10, 2026Updated last month