AIM-Harvard / TotalSegmentator-to-nnUNet-format-convertLinks
Convert the TotalSegmentator dataset into the nnUNet format
☆17Updated 2 years ago
Alternatives and similar repositories for TotalSegmentator-to-nnUNet-format-convert
Users that are interested in TotalSegmentator-to-nnUNet-format-convert are comparing it to the libraries listed below
Sorting:
- [ICLR 2025] Learning General-purpose Biomedical Volume Representations using Randomized Synthesis☆83Updated 3 months ago
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆175Updated last month
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆75Updated last week
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆112Updated 10 months ago
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆51Updated 3 months ago
- Baseline methods, training scripts, and pretrained models for LUMIR challenge at Learn2Reg 2024☆28Updated 4 months ago
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆102Updated last month
- ☆106Updated 3 weeks ago
- ☆27Updated last year
- highest ranked algorithm of Learn2Reg requires little to no training and runs within seconds☆68Updated 7 months ago
- ☆142Updated 2 months ago
- Sparsely Annotated Region and Organ Segmentation (SAROS) - A large, heterogeneous, and sparsely annotated segmentation dataset on CT imag…☆58Updated 9 months ago
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆104Updated 7 months ago
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling☆42Updated last year
- COSTA: A Multi-center Multi-vendor TOF-MRA Dataset and A Novel Cerebrovascular Segmentation Network☆36Updated last year
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆78Updated last year
- This is the official Pytorch implementation of "Unsupervised Deformable Image Registration with Absent Correspondences in Pre-operative a…☆44Updated 2 years ago
- A library for performing image registration using deep learning, regularized by inverse consistency☆55Updated this week
- MRISegmentator☆45Updated 2 months ago
- 3D Slicer extension for Segment Anything Model (SAM) developed by Meta☆65Updated 4 months ago
- Unified super-resolution of medical images in PyTorch☆89Updated 3 months ago
- Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]☆68Updated 2 years ago
- A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.☆120Updated 4 months ago
- NeurIPS 2023 - Lung250M-4B: A Combined 3D Dataset for CT- and Point Cloud-Based Intra-Patient Lung Registration☆40Updated last year
- Preprocessing scripts: from dicom to aligned nitfy for SynthRAD2023 Grand Challenge☆68Updated 2 years ago
- Official repository for autoPET I+II machine lerning challenge☆80Updated last year
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆38Updated 2 years ago
- MedShapeNet - A Large-Scale Dataset of 3D Medical Shapes for Computer Vision☆83Updated last year
- MIST: A simple and scalable end-to-end framework for 3D medical imaging segmentation.☆52Updated last month
- ☆26Updated 3 months ago