JSybrandt / MOLIERELinks
The Automatic Biomedical Hypothesis Generation System.
β22Updated 5 years ago
Alternatives and similar repositories for MOLIERE
Users that are interested in MOLIERE are comparing it to the libraries listed below
Sorting:
- NLP pipeline using word2vec (preprocessing/embedding/prediction/clustering)β116Updated last year
- Extracting biomedical relationships from literature with Snorkel πβ58Updated 4 years ago
- AGATHA: Automatic Graph-mining And Transformer based Hypothesis generation Approachβ59Updated 5 years ago
- node2vec implementation in C++β53Updated 5 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work β¦β102Updated 5 years ago
- NLM .nxml to text format conversionβ24Updated 10 years ago
- β74Updated last year
- Extracting scientific claims from biomedical abstracts (powered by AllenNLP)β144Updated 4 years ago
- NLP framework in python for entity recognition and relationship extractionβ115Updated 2 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://giβ¦β45Updated 3 years ago
- Feature learning over RDF data and OWL ontologiesβ46Updated 3 years ago
- TAXI: a Taxonomy Induction Method based on Lexico-Syntactic Patterns, Substrings and Focused Crawlingβ29Updated 2 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.β22Updated 5 years ago
- β122Updated 7 years ago
- word vector libraryβ34Updated 5 years ago
- β70Updated 3 years ago
- Reach Biomedical Information Extractionβ98Updated 9 months ago
- Taxonomy refinement method to improve domain-specific taxonomy systems.β29Updated last year
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).β157Updated 2 years ago
- This repository contains machine learning related work for the corpus to graph project, including Jupyter research notebooks and a Flask β¦β46Updated 9 years ago
- all-paths graph kernel for protein-protein interaction extractionβ12Updated 11 years ago
- Retrieve and process PubTator annotationsβ44Updated 2 years ago
- Crowdsourced ground truth for medical relation extraction.β69Updated 6 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)β33Updated 6 years ago
- Knowledge Base Embeddings for DBpediaβ86Updated 2 years ago
- Bibliographic Entity Automatic Recognition and Disambiguationβ65Updated 5 years ago
- Creating a Knowledge Graph of 44000 COVID-19 scholarly articlesβ21Updated 5 years ago
- Named Entity Recognition for biomedical entitiesβ48Updated 2 years ago
- A convolutional neural network model for relation extraction.β12Updated 2 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and heaβ¦β55Updated 7 years ago