JSybrandt / MOLIERE
The Automatic Biomedical Hypothesis Generation System.
☆22Updated 5 years ago
Alternatives and similar repositories for MOLIERE:
Users that are interested in MOLIERE are comparing it to the libraries listed below
- AGATHA: Automatic Graph-mining And Transformer based Hypothesis generation Approach☆56Updated 4 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Updated 4 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- ☆41Updated 5 years ago
- NLP pipeline using word2vec (preprocessing/embedding/prediction/clustering)☆115Updated last year
- NLM .nxml to text format conversion☆24Updated 10 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Updated 6 years ago
- Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)☆33Updated 6 years ago
- ☆73Updated last year
- A python implementation of the Ensemble Biclustering for Classification (EBC) algorithm. EBC is a co-clustering algorithm that allows you…☆20Updated 8 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- NLP framework in python for entity recognition and relationship extraction☆115Updated 2 years ago
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago
- ☆67Updated 2 years ago
- Web interface that allows users to perform computer-assisted text annotation☆16Updated 2 years ago
- Open Targets Library ETL Pipeline | Apache Beam☆16Updated 4 years ago
- DeepDive Biomedical Tools☆14Updated 8 years ago
- Extracting scientific claims from biomedical abstracts (powered by AllenNLP)☆141Updated 3 years ago
- Retrieve and process PubTator annotations☆44Updated last year
- ☆15Updated 7 years ago
- Reach Biomedical Information Extraction☆97Updated 5 months ago
- a Python repository for content-based recommendation based on Latent semantic analysis (LSA) topic distance and Rocchio Algorithm, see t…☆47Updated 7 years ago
- A machine learning software for extracting information from scholarly documents☆23Updated 4 years ago
- Tools for working with the S800 corpus☆11Updated 4 years ago
- TAXI: a Taxonomy Induction Method based on Lexico-Syntactic Patterns, Substrings and Focused Crawling☆28Updated last year
- Concept2vec Metrics for Evaluating Quality of Embeddings for Ontological Concepts☆14Updated 6 years ago
- ☆15Updated 6 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 4 years ago
- Feature learning over RDF data and OWL ontologies☆45Updated 2 years ago
- SNP Extraction Tool for Human Variations☆27Updated last year