Alternatives and similar repositories for genome-transformer

Users that are interested in genome-transformer are comparing it to the libraries listed below

• CMUSchwartzLab / cancer-phylogenetics-prognostic-prediction
  Improving Personalized Prediction of Cancer Prognoses with Clonal Evolution Models
  ☆22Updated 5 years ago
• renshuangxia / DeepGRMF
  ☆13Updated 3 years ago
• CMUSchwartzLab / TUSV-ext
  ☆21Updated 6 months ago
• fanglu0411 / sgs
  SGS, is a user-friendly, collaborative and versatile browser for visualizing single-cell and spatial multiomics data.
  ☆101Updated 5 months ago
• CMUSchwartzLab / NND
  Neural network deconvolution
  ☆8Updated 4 years ago
• PENGLU-WashU / IMC_Denoise
  IMC_Denoise: a software package to enhance Imaging Mass Cytometry - Nature Communications
  ☆51Updated 11 months ago
• CMUSchwartzLab / RADs
  ☆11Updated 3 years ago
• CMUSchwartzLab / FISH_deconvolution
  code implementing methods for pooling bulk and single cell data and FISH data for copy number deconvolution
  ☆10Updated 5 years ago
• ISYSLAB-HUST / SSAlign
  ☆42Updated last month
• zzdzr / Fun
  Algorithm to identify chromatin fountains
  ☆21Updated last year
• zhouyflab / R-Predictor
  The pipeline of annotating plant disease resistance genes based on deep protein language and machine learning models
  ☆107Updated 6 months ago
• Lzcstan / DrugLAMP
  A PyTorch-based system for highly accurate drug-target interaction predictions utilizing multi-modal large language models to discern str…
  ☆34Updated last year
• yifengtao / CADRE
  CADRE: Contextual Attention-based Drug REsponse
  ☆11Updated 4 years ago
• GenerTeam / GENERanno
  GENERanno: A Genomic Foundation Model for Metagenomic Annotation
  ☆301Updated 2 weeks ago
• osmanbeyoglulab / CITRUS
  ☆22Updated 2 years ago
• johon-lituobang / REDS_Mean
  Robust estimations from distribution structures: Mean.
  ☆18Updated last year
• GenerTeam / GENERator
  GENERator: A Long-Context Generative Genomic Foundation Model
  ☆428Updated 2 weeks ago
• Jinjiarui / DRSR
  Code for SIGIR'20 “A Deep Recurrent Survival Model for Unbiased Ranking”
  ☆43Updated 2 years ago
• johon-lituobang / REDS_Invariant_Moments
  Robust estimations from distribution structures: Invariant moments.
  ☆18Updated last year
• XueZ-phd / FocusNet-Classifying-better-by-focusing-on-confusing-classes
  The PyTorch implementation of our Pattern Recognition 2022 paper, FocusNet, on ILSVRC2012
  ☆39Updated 3 years ago
• ChiZhang-bit / Knowledge-Graph-KG-Augmented-Disease-Prediction
  DASFAA 2024 - Knowledge Graph (KG) Augmented Disease Prediction Code
  ☆41Updated last year
• OncoGPT1 / OncoGPT1
  Config files for my GitHub profile.
  ☆53Updated last year
• CMUSchwartzLab / RAD
  Robust and Accurate Deconvolution
  ☆13Updated 4 years ago
• yuhong2024 / BrassicaEDB
  BrassicaEDB 2.0 —A Gene Expression Database for Brassica Crops The transcriptome level provides Brassica researchers with a comprehensive…
  ☆35Updated 2 months ago
• jingge326 / ivpvae
  ☆33Updated last year
• weijiaheng / Credible-sample-elicitation
  [AISTATS2021] Official implementation of "Sample Elicitation"
  ☆29Updated 4 years ago
• qiangwang57 / coreg_flim_histology
  ☆20Updated 3 years ago
• KK-Kris / Stock-sentimnet-analysis
  provide a new methods for the Chinese stock comment sentiment analysis
  ☆23Updated 2 years ago
• eric9n / Kun-peng
  Kun-peng: an ultra-fast, low-memory footprint and accurate taxonomy classifier for all
  ☆125Updated 3 months ago
• deep-real / TRO
  The Pytorch implementation for "Topology-aware Robust Optimization for Out-of-Distribution Generalization" (ICLR 2023)
  ☆28Updated 4 months ago