GSTT-CSC / XNAT
Tracks general documentation, standard operating procedures (SOP) and helper scripts for XNAT.
☆16Updated last week
Related projects ⓘ
Alternatives and complementary repositories for XNAT
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 4 months ago
- defacing utility for MRI images☆112Updated 9 months ago
- XNAT in Python☆72Updated 7 months ago
- Tools for MRI mouse brain morphometry☆30Updated 7 years ago
- NeMo brain tractograms tool☆13Updated 3 years ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆53Updated last month
- Processing tools for high-resolution neuroimaging☆63Updated 3 weeks ago
- The plug-and-play, browser-accessible, containerised data analysis environment.☆43Updated this week
- Gradient Unwarping in Python☆30Updated 4 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆44Updated 3 months ago
- Neuroimaging widgets for jupyter notebooks☆84Updated last year
- Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization☆159Updated last month
- NIST-MNI image processing pipelines☆10Updated last month
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆60Updated last week
- Python utilities for medical image and surface-based analysis☆27Updated last month
- niimath - a clone of fslmaths. Try the live demo:☆55Updated 2 months ago
- atlasBREX: Automated averaged template-derived brain extraction in animal MRI☆15Updated 9 months ago
- Massively parallel Monte Carlo diffusion MR simulator written in Python.☆24Updated last week
- Automated Fiber Quantification ... in Python☆57Updated last month
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆75Updated last week
- BIDS app wrapping recon-all from FreeSurfer☆41Updated last week
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆61Updated this week
- A Python implementation of 'dual-coding'☆39Updated 6 months ago
- Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space☆27Updated last year
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆30Updated last week
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆121Updated 7 months ago
- a standalone fork of nipy/nibabel#656☆28Updated last month
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆57Updated 2 weeks ago
- Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.☆132Updated last year
- DCE MRI analysis in Julia☆37Updated 3 years ago