Deep-MI / LITLinks
FastSurfer Lesion Inpainting Tool (FastSurfer-LIT) for lesion inpainting e.g. for whole brain segmentation and cortical surface reconstruction in the presence of tumor, surgical cavities or other abnormalities
☆18Updated last week
Alternatives and similar repositories for LIT
Users that are interested in LIT are comparing it to the libraries listed below
Sorting:
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated 10 months ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆40Updated 5 months ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆42Updated 10 months ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆31Updated last week
- The dHCP deep learning-based neonatal structural MRI processing pipeline.☆19Updated last year
- Cranial 4D Flow Analysis Tool☆14Updated 3 months ago
- MIRTK based SVR reconstruction☆64Updated 9 months ago
- perivascular space segmentation☆17Updated 3 years ago
- DeepWMH: Annotation-free white matter hyperintensity (WMH) lesion segmentation tool using deep learning.☆19Updated 7 months ago
- White matter tractography clustering and more...☆80Updated 7 months ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆13Updated 5 months ago
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆35Updated last year
- FetalSynthSeg Code☆15Updated 10 months ago
- iBEAT V2.0 Docker☆14Updated 3 weeks ago
- Full head segmentation☆17Updated 2 months ago
- CNN based brain masking☆19Updated 7 months ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆180Updated last year
- Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context☆21Updated 5 months ago
- Code for magnetic susceptibility source separation☆29Updated 4 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Updated last year
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆115Updated last year
- Multi-site dMRI harmonization☆49Updated 8 months ago
- structural analysis of neonatal brain MRI scans☆59Updated 4 years ago
- LGI: Cortical Shape-Adaptive Local Gyrification Index☆12Updated 5 years ago
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆74Updated 2 years ago
- Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensiti…☆25Updated last month
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆30Updated 2 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆84Updated last month
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆69Updated 2 years ago
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆47Updated 4 years ago