individual-brain-charting / public_analysis_code
Public analysis code for the IBC project
☆20Updated 2 weeks ago
Alternatives and similar repositories for public_analysis_code:
Users that are interested in public_analysis_code are comparing it to the libraries listed below
- Load fMRIprep confounds in python☆36Updated 3 years ago
- Python implementation of Wu et al (2018)'s registration fusion☆27Updated 4 years ago
- Tutorials for task-based activation and network analysis using Python based modules: Nilearn and Nistats. Notebooks prepared on Neurohack…☆26Updated 6 years ago
- Nuisance removal tool for fMRI data☆56Updated last year
- Nipype implementation of BetaSeries Correlations (Beta)☆34Updated last year
- Simple and brief walkthroughs to help grad students/new users complete basic tasks with workbench command and common HCP pipeline output …☆16Updated 3 years ago
- Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity☆46Updated 9 months ago
- A Python implementation of the brain connectivity toolbox. **Not actively maintained.**☆31Updated 3 years ago
- BigBrainWarp☆23Updated 8 months ago
- The Midnight Scanning Club Codebase☆33Updated 5 years ago
- Plot the boundaries of ROIs on a surface☆66Updated 10 months ago
- The code to generate individualize state-specific node-level parcellations. For the original paper, see Salehi et al., "There is no singl…☆9Updated 5 years ago
- Benchmark denoising strategies available from fmriprep.☆16Updated last year
- Generate and run SLURM jobs on HPCs☆12Updated last year
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆27Updated 4 years ago
- An exemplary task analysis workflow to run on OpenNeuro's ds000003 data, after preprocessing with fMRIPrep☆30Updated 3 years ago
- Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.☆35Updated 9 months ago
- Quantifying and describing blood-oxygen-level dependent (BOLD) spatial propagation activity☆20Updated last year
- Dictionary of Functional Modes for brain imaging☆23Updated 4 years ago
- A package for publication-ready brain surface figures☆58Updated 7 months ago
- Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…☆36Updated 6 years ago
- Tutorial papers and dataset illustrating group connectivity analysis with DCM and PEB☆45Updated 9 months ago
- Functional alignment and template estimation library for functional Magnetic Resonance Imaging data☆24Updated last week
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆49Updated 3 weeks ago
- To convert Human Connectome projects(HCP) data to BIDS std☆28Updated 2 years ago
- Diffuse Cluster Estimation and Regression. A de-noising tool.☆19Updated 2 years ago
- JuSpyce - a toolbox for flexible assessment of spatial associations between brain maps☆10Updated last year
- MATLAB toolbox for visualizing brain data on surfaces.☆33Updated 3 months ago
- A prediction-based extension of network-based statistics.☆32Updated 2 months ago
- Rough draft of a guide for reviewing fmriprep's QA outputs☆28Updated 3 years ago