Alternatives and similar repositories for synthstrip

Users that are interested in synthstrip are comparing it to the libraries listed below

• pBFSLab / DeepPrep
  DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
  ☆99Updated last month
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆79Updated 3 months ago
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆108Updated 9 months ago
• freesurfer / surfa
  Python utilities for medical image and surface-based analysis
  ☆33Updated 2 weeks ago
• RDadarwal / Diffusion-MRI
  Jupyter notebooks for analyzing diffusion MRI data in order to calculate DTI, DKI, NODDI, SS3T-CSD, and MSMT-CSD modelled parametric maps
  ☆14Updated 2 years ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆163Updated last month
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆75Updated last week
• BBillot / SynthSR
  A framework for joint super-resolution and image synthesis, without requiring real training data
  ☆172Updated last year
• yu02019 / BEN
  ☆29Updated last year
• rpomponio / neuroHarmonize
  Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…
  ☆111Updated this week
• vishnubashyam / DeepBrainNet
  Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…
  ☆55Updated 5 years ago
• CompImg / LST-AI
  LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation
  ☆37Updated 6 months ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆151Updated this week
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆50Updated 3 years ago
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆76Updated last month
• SCAN-NRAD / DL-DiReCT
  DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation
  ☆28Updated 5 months ago
• Jfortin1 / neuroCombat
  Harmonization of multi-site imaging data with ComBat (Python)
  ☆149Updated 2 years ago
• pBFSLab / FastCSR
  ☆28Updated last year
• npnl / PALS
  Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…
  ☆24Updated 5 months ago
• BioMedIA / dhcp-structural-pipeline
  structural analysis of neonatal brain MRI scans
  ☆56Updated 4 years ago
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆52Updated last year
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆49Updated 4 months ago
• wwu-mmll / deepbet
  Fast brain extraction using neural networks
  ☆42Updated last year
• m-qiang / dhcp-dl-neonatal
  The dHCP deep learning-based neonatal structural MRI processing pipeline.
  ☆15Updated 11 months ago
• wwu-mmll / deepmriprep
  Neural network-based MRI preprocessing: Prep 🧠 images in seconds 🔥
  ☆39Updated last week
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆65Updated 3 weeks ago
• QMICodeBase / TORTOISEV4
  Official TORTOISE Diffusion MRI Processing Pipeline V4 Source Code and Documentation
  ☆30Updated 3 weeks ago
• NYU-DiffusionMRI / SMI
  Toolbox for parameter estimation of the Standard Model of diffusion in white matter
  ☆27Updated 3 months ago
• neurolabusc / Clinical
  Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)
  ☆47Updated 4 years ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆71Updated this week