Python package providing mesoscale connectivity models for mouse.
☆39Apr 3, 2024Updated 2 years ago
Alternatives and similar repositories for mouse_connectivity_models
Users that are interested in mouse_connectivity_models are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Interactive visualization tool for multiple volumes, meshes and points based on VTK. The app can be controlled with Python scripts (optio…☆11Mar 13, 2022Updated 4 years ago
- BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome☆10May 13, 2022Updated 4 years ago
- code for reading and processing Allen Institute for Brain Science data☆386Feb 20, 2026Updated 3 months ago
- Functions for handling RNA-seq files and formats as input and output for scrattch functions.☆11Aug 20, 2025Updated 9 months ago
- Generate a package-manager-friendly mouse brain atlases collection.☆22Aug 4, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Convert biological neuronal networks to artificial recurrent neuronal networks☆22Jun 22, 2022Updated 3 years ago
- A Python package to download neuronal morphologies☆17May 5, 2026Updated 2 weeks ago
- course materials for the 2017 Summer Workshop on the Dynamic Brain☆12Jan 4, 2018Updated 8 years ago
- Brain Modeling Toolkit☆324Mar 29, 2026Updated last month
- This python module simplifies the development of modules that would like to define and check a particular set of input parameters, but be…☆25Dec 22, 2025Updated 4 months ago
- a Python machine learning library for neurophysiology data☆36Nov 10, 2018Updated 7 years ago
- GIve easy, high-level access to ome-zarr fileset☆22Sep 22, 2025Updated 7 months ago
- Tutorial☆11Jan 25, 2021Updated 5 years ago
- [This repository is archived, will be deprecated after the release of phy 2.0]☆31Jun 14, 2019Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Analogs of Linguistic Structure in Deep Representations☆19Jul 27, 2017Updated 8 years ago
- Scripts to preprocess mouse MRI/fMRI/dMRI☆12May 22, 2024Updated last year
- computes intrinsic cell features from intracellular electrophysiology data☆30Dec 10, 2025Updated 5 months ago
- ☆16Nov 24, 2023Updated 2 years ago
- Analyze brain surface/volume (gifti, cifti, nifti) in R and extract networks☆10Oct 4, 2022Updated 3 years ago
- Python codes and sample scripts for connectome-spatial smoothing (CSS)☆11Sep 21, 2023Updated 2 years ago
- NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files☆27Aug 28, 2025Updated 8 months ago
- Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.☆52Feb 23, 2026Updated 2 months ago
- This toolbox easily and automatically processes Neuropixels and Myomatrix data recorded during experiments☆13Aug 9, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- IBL core shared libraries☆68May 11, 2026Updated last week
- Dimensionality-reduction and classification for morphology and electrophysiology☆12Sep 23, 2024Updated last year
- Hyperalignment is a functional alignment method that aligns subjects' brain data in a high-dimensional space of voxels/features.☆18Mar 16, 2026Updated 2 months ago
- Tools for working with single-neuron morphological reconstructions☆22Apr 16, 2026Updated last month
- Gallery of visualizations and analyses of the Allen Brain Observatory☆25Aug 10, 2022Updated 3 years ago
- Brain Connectivity Analysis on FMRi data in a memory task performed at Baycrest Hospital☆10May 3, 2020Updated 6 years ago
- Cortical Parcellation☆10Jan 31, 2020Updated 6 years ago
- ☆12Sep 17, 2018Updated 7 years ago
- ☆26Nov 14, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Example code for reading SpikeGLX metadata and binary files☆14Nov 11, 2024Updated last year
- Plot an interactive circular graph to illustrate connections in a network in MATLAB.☆62Apr 22, 2022Updated 4 years ago
- Some of my python tools for computational neuroscience☆12May 11, 2026Updated last week
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- ☆19Apr 12, 2024Updated 2 years ago
- ☆42Jan 23, 2024Updated 2 years ago
- Python package for rich club analysis and detection of graphs, using igraph☆23Mar 8, 2016Updated 10 years ago