zapaishchykova / SegmentationReviewLinks
Slicer3D extension for rating using Likert-type score Deep-learning generated segmentations, with segment editor functionality. Created to speed up the validation process done by a clinician - the dataset loads in one batch with no need to load masks and volumes separately.
☆26Updated 2 months ago
Alternatives and similar repositories for SegmentationReview
Users that are interested in SegmentationReview are comparing it to the libraries listed below
Sorting:
- Stores the MHub models dockerfiles and scripts.☆10Updated 4 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆49Updated 3 weeks ago
- Precision medicine toolbox☆70Updated last year
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆42Updated last month
- Medical Image Radiomics Processor☆69Updated 2 weeks ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆47Updated last month
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆91Updated last week
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆81Updated 10 months ago
- A project to provide custom sorting and renaming of dicom files☆78Updated 3 months ago
- Computed tomography to body composition (Comp2Comp).☆91Updated 2 weeks ago
- The easiest tool for experimenting with radiomics features.☆40Updated last year
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆133Updated 2 months ago
- Python package to simplify access to the data available from NCI Imaging Data Commons☆16Updated last month
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆16Updated 3 months ago
- DICOM RT-Struct to mask☆101Updated last year
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆30Updated last year
- Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.☆91Updated 11 months ago
- RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…☆105Updated 3 weeks ago
- This repository supports the BENDER series of videos for the MICCAI Education Challenge, 2022.☆12Updated 2 years ago
- An AI-powered open-source medical image analysis toolbox☆63Updated last year
- Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and Simpl…☆101Updated 8 months ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆51Updated 5 months ago
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆103Updated 8 months ago
- Automatic sorting of brain MRI scans by scan type☆26Updated 7 months ago
- ☆75Updated last month
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆76Updated last year
- PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion☆51Updated last month
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆69Updated last week
- Library for generating images by sampling a GMM conditioned on label maps☆27Updated last year
- ☆42Updated 2 years ago