Slicer3D extension for rating using Likert-type score Deep-learning generated segmentations, with segment editor functionality. Created to speed up the validation process done by a clinician - the dataset loads in one batch with no need to load masks and volumes separately.
☆26Jun 19, 2025Updated 8 months ago
Alternatives and similar repositories for SegmentationReview
Users that are interested in SegmentationReview are comparing it to the libraries listed below
Sorting:
- Stores the MHub models dockerfiles and scripts.☆11Jan 28, 2026Updated last month
- Python package to simplify access to the data available in NCI Imaging Data Commons☆20Updated this week
- Public code repository to reproduce our MICCAI 2022 paper: "Automatic identification of segmentation errors for radiotherapy using geomet…☆11Dec 8, 2022Updated 3 years ago
- Python wrapper for Plastimatch.☆19Apr 1, 2025Updated 11 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆57Updated this week
- This repository provides a 3D implementation of DINOv2 for self-supervised pretraining on volumetric (3D) medical images using Lightly, M…☆50Feb 18, 2026Updated 2 weeks ago
- Docker image of CAT12 (standalone version)☆10May 28, 2025Updated 9 months ago
- A deep learning-based fully-automatic intravenous contrast detection tool for head-and-neck and chest CT scans.☆24Aug 15, 2023Updated 2 years ago
- A python library for loading dicom directories into pandas☆11Nov 2, 2025Updated 4 months ago
- ☆13Jun 12, 2023Updated 2 years ago
- Automatic sorting of brain MRI scans by scan type☆26Jan 13, 2025Updated last year
- DICOM Private Dicts☆11Sep 12, 2022Updated 3 years ago
- Workshop on Medical Image Analysis using pydicom, SimpleITK, ITK, itkwidgets, numpy, seaborn, and matplotlib☆13Nov 11, 2020Updated 5 years ago
- [Nature Machine Intelligence 2024] Code and evaluation repository for the paper☆131Mar 5, 2025Updated last year
- A curated list of anatomical features in the human abdomen and relevant open datasets.☆21Sep 26, 2019Updated 6 years ago
- Instructions for the RWTH Compute Cluster☆12Nov 8, 2022Updated 3 years ago
- Streamline deep learning experiments using config files☆72Dec 9, 2025Updated 2 months ago
- Resources for the KG course at IDS, Maastricht University☆13Feb 25, 2025Updated last year
- ☆37Jun 13, 2024Updated last year
- INSPECT dataset/benchmark paper, accepted by NeurIPS 2023☆46May 20, 2025Updated 9 months ago
- A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.☆17May 8, 2025Updated 9 months ago
- A multilabel lymph node segmentation dataset from contrast CT☆27Jul 29, 2025Updated 7 months ago
- 🦎 Minimal Python command-line parser inspired by Facebook's Hydra. Handles and parses arbitrary arguments into dot-accessible nested dic…☆20Jan 20, 2022Updated 4 years ago
- 3D Medical Image Retrieval in Radiology☆18Dec 19, 2024Updated last year
- A project to provide custom sorting and renaming of dicom files☆85May 6, 2025Updated 10 months ago
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆59Nov 7, 2025Updated 4 months ago
- Self-guided notebook tutorials to help get started with IDC☆45Feb 16, 2026Updated 2 weeks ago
- CT-FM: A 3D Image-Based Foundation Model for Computed Tomography☆63Feb 13, 2025Updated last year
- Python-based Advanced Numerical Nonlinear Optimization for Radiotherapy☆27Feb 25, 2026Updated last week
- PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion☆53Feb 2, 2026Updated last month
- XDRT (XDR Toolkit) is a python toolkit to work with the Elekta XDR and XVI file formats.☆20Apr 22, 2025Updated 10 months ago
- Free-Text Promptable Universal 3D Medical Image Segmentation☆152Feb 25, 2026Updated last week
- Python package for DICOM-SEG medical segmentation file reading and writing☆85Aug 23, 2023Updated 2 years ago
- Official TORTOISE Diffusion MRI Processing Pipeline V4 Source Code and Documentation☆34Dec 19, 2025Updated 2 months ago
- An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…☆67Jul 11, 2025Updated 7 months ago
- Automated Multiscale 3D Feature Learning for Vessels Segmentation in Thorax CT Images☆24Jul 26, 2019Updated 6 years ago
- ESAPI Plan QA in Eclipse☆11Mar 23, 2020Updated 5 years ago
- Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…☆87Jan 29, 2026Updated last month
- Precision medicine toolbox☆71Apr 11, 2024Updated last year