vanderschaarlab / climbLinks
CliMB: An AI-enabled Partner for Clinical Predictive Modeling
☆24Updated 3 weeks ago
Alternatives and similar repositories for climb
Users that are interested in climb are comparing it to the libraries listed below
Sorting:
- Code for paper "A deep learning framework for drug repurposing via emulating clinical trials on real world patient data" (Accepted to Nat…☆98Updated 3 years ago
- Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data☆35Updated last month
- SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases☆73Updated 2 months ago
- ☆35Updated 2 years ago
- Coherent Deconfounding Autoencoder (CODE-AE) can extract both common biological signals shared by incoherent samples and private represen…☆17Updated 11 months ago
- Code and dataset for SNP2Vec paper☆21Updated 2 years ago
- ☆30Updated this week
- ClinVec: Unified Embeddings of Clinical Codes Enable Knowledge-Grounded AI in Medicine☆71Updated last month
- scPretrain: Multi-task self-supervised learning for cell type classification☆23Updated 3 years ago
- A deep-learning framework for multi-omics integration☆27Updated 2 years ago
- Build foundation model on RNA or DNA data☆27Updated last week
- ☆144Updated last week
- a super basic tutorial on how to create a pytorch models for raw DNA sequences☆25Updated 3 years ago
- ☆25Updated last month
- Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)☆73Updated last year
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆31Updated 6 months ago
- Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…☆20Updated 2 years ago
- ☆147Updated 8 months ago
- Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…☆17Updated 5 years ago
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆125Updated 3 years ago
- ☆41Updated 3 years ago
- Few shot learning for cancer☆36Updated 3 years ago
- ☆26Updated 2 years ago
- Framework for Interpretable Neural Networks☆109Updated 6 months ago
- Multi-task deep learning framework for multi-omics data analysis☆48Updated 3 years ago
- Benchmark agents on BioML tasks☆44Updated 2 weeks ago
- Tofu is a Python tool for generating synthetic UK Biobank data.☆62Updated 2 years ago
- Testing if UMAP/tSNE overfit their intrinsic dimensionality☆15Updated 2 years ago
- Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)☆80Updated 3 years ago
- Disease subnetwork detection with explainable Graph Neural Networks☆25Updated last year