AnDiChallenge / andi_datasets
andi_datasets provides functions to generate, save, load and manipulate datasets of diffusion anomalous trajectories. It is part of the Anomalous Diffusion (ANDI) Challenge.
☆29Updated 4 months ago
Alternatives and similar repositories for andi_datasets
Users that are interested in andi_datasets are comparing it to the libraries listed below
Sorting:
- Python implementation of the force and diffusion inference method described in (Frishman and Ronceray, Phys. Rev. X 10, 021009, 2020).☆28Updated 2 years ago
- Modeling toolkit for biochemical simulation☆74Updated 3 months ago
- Python implementation of Underdamped Langevin Inference, a method to infer the dynamical equation of underdamped stochastic systems from …☆16Updated 2 years ago
- ☆36Updated last year
- PyGL: statistical field theory in Python. github.com/rajeshrinet/pygl☆27Updated last week
- Solving an Analytic Continuation problem with a deep Artificial Neural Network (ANN)☆20Updated 5 years ago
- kramersmoyal: Kramers-Moyal coefficients for stochastic data of any dimension, to any desired order☆72Updated 4 months ago
- KITP tutorial codes for Active Brownian Particles☆12Updated 3 years ago
- Tutorials for the book.☆12Updated 3 years ago
- Statistical mechanics models such as random cluster models, random growth models and related processes.☆12Updated 3 months ago
- Tutorial on "Simulations of pattern formation in biological cells"☆12Updated 3 weeks ago
- Python package for automated bifurcation analysis and parameter continuations, based on Auto-07p.☆22Updated 3 weeks ago
- ☆37Updated last year
- Pychastic is a stochastic differential equations integrator written entirely in python.☆12Updated 3 months ago
- Notebooks for "A high bias low-variance introduction to Machine Learning for physicists."☆69Updated 5 years ago
- The framework for inferring Langevin dynamics from spike data☆32Updated last week
- Dimensionality Reduction with Eilenberg-MacLane Coordinates☆40Updated last month
- Atomic graph models for molecules and crystals in Julia☆61Updated 2 years ago
- Exercises and notes for N.G. Van Kampen's Stochastic Processes in Physics and Chemistry☆36Updated 6 months ago
- GPU-accelerated simulations of Voronoi and vertex models of cells. Initial version published in Computer Physics Communications: https://…☆21Updated last month
- Deterministic particle dynamics for simulating Fokker-Planck probability flows☆24Updated 2 years ago
- Distance-based Analysis of DAta-manifolds in python☆127Updated last month
- Algorithm for Revealing Network Interactions (ARNI) from nonlinear collective dynamics☆26Updated 7 years ago
- Pytorch implement of the paper Neural Canonical Transformation with Symplectic Flows☆29Updated 5 years ago
- Wigner's 3J, 6J, 9J symbols for python☆21Updated 9 months ago
- Minicourse on Machine Learning for Many-Body Physics, Sept 25 – 29, 2017 São Paulo, Brazil☆20Updated 7 years ago
- Utilities for formatting matplotlib figures☆31Updated 2 months ago
- Simulate Anderson localization and tight binding on graphs.☆14Updated last year
- Hierarchical variational models for physics.☆17Updated 4 years ago
- Automated dynamical systems inference☆38Updated last year