NILAB-UvA / bidsify
Tool to convert raw MRI datasets to BIDS-compatible datasets
☆33Updated 3 years ago
Alternatives and similar repositories for bidsify:
Users that are interested in bidsify are comparing it to the libraries listed below
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆26Updated 4 years ago
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆49Updated 3 weeks ago
- Nuisance removal tool for fMRI data☆56Updated last year
- Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…☆36Updated 6 years ago
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆27Updated 4 years ago
- Rough draft of a guide for reviewing fmriprep's QA outputs☆28Updated 3 years ago
- An exemplary task analysis workflow to run on OpenNeuro's ds000003 data, after preprocessing with fMRIPrep☆30Updated 3 years ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆38Updated last year
- A BIDS App for minimal preprocessing using the HCP Pipelines☆35Updated 5 months ago
- Tools for mesh surface-based operations☆35Updated last month
- For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of sp…☆19Updated last month
- Nipype implementation of BetaSeries Correlations (Beta)☆34Updated last year
- A package for publication-ready brain surface figures☆58Updated 7 months ago
- MATLAB toolbox for visualizing brain data on surfaces.☆33Updated 3 months ago
- Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.☆35Updated 9 months ago
- MATLAB / Octave tools for BIDS datasets☆53Updated this week
- lipsia3.0☆21Updated 2 weeks ago
- Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.☆64Updated last year
- MATLAB code for reading and writing CIFTI connectivity files☆65Updated 5 months ago
- The Resting-state Pain susceptibility Network signature.☆15Updated 2 years ago
- Resting state HRF estimation from BOLD-fMRI signal☆34Updated 2 years ago
- fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…☆65Updated 2 years ago
- The Midnight Scanning Club Codebase☆33Updated 5 years ago
- Docker version of HIPS-THOMAS☆23Updated 3 weeks ago
- Support for CMRR multi-band pulse sequences☆58Updated last month
- SPM tools to get the best of mass univariate analyses☆42Updated 5 months ago
- Diffuse Cluster Estimation and Regression. A de-noising tool.☆19Updated 2 years ago
- Slice Display is a MATLAB toolbox for visualizing fMRI data. It can make dual-coded images (simultaneous display of contrast estimate and…☆13Updated last year
- Python implementation of Wu et al (2018)'s registration fusion☆27Updated 4 years ago
- GUI-based MATLAB software for optimizing the design of fMRI tasks☆15Updated last year