NILAB-UvA / bidsifyLinks
Tool to convert raw MRI datasets to BIDS-compatible datasets
☆34Updated 3 years ago
Alternatives and similar repositories for bidsify
Users that are interested in bidsify are comparing it to the libraries listed below
Sorting:
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆49Updated 2 months ago
- Nuisance removal tool for fMRI data☆57Updated last year
- SPM tools to get the best of mass univariate analyses☆43Updated 8 months ago
- Nipype implementation of BetaSeries Correlations (Beta)☆34Updated 2 years ago
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆26Updated 4 years ago
- An exemplary task analysis workflow to run on OpenNeuro's ds000003 data, after preprocessing with fMRIPrep☆31Updated 4 years ago
- Python functions to convert E-Prime files to csvs. Not currently being developed, but issues and PRs welcome!☆45Updated 4 years ago
- A package for publication-ready brain surface figures☆62Updated 10 months ago
- MATLAB / Octave tools for BIDS datasets☆55Updated 3 weeks ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆40Updated last year
- Scripts for comparing different fmriprep denoising approaches on quality control functional connectivity (QC-FC) motion, QC-FC distance-d…☆15Updated 3 years ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆47Updated 2 years ago
- Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.☆65Updated 2 years ago
- sparse Canonical Correlation Analysis☆28Updated 7 years ago
- Standalone MATLAB implementation of permutation TFCE correction☆42Updated 6 years ago
- A VM setup for use in fMRI analysis and education☆56Updated 10 months ago
- fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…☆68Updated 3 years ago
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆28Updated 4 years ago
- Slice Display is a MATLAB toolbox for visualizing fMRI data. It can make dual-coded images (simultaneous display of contrast estimate and…☆13Updated last year
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆25Updated this week
- A BIDS App for minimal preprocessing using the HCP Pipelines☆36Updated 8 months ago
- Handy scripts for SPM☆74Updated 4 years ago
- Rough draft of a guide for reviewing fmriprep's QA outputs☆30Updated 3 years ago
- Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…☆38Updated 7 years ago
- JuBrain Anatomy Toolbox☆20Updated 6 years ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆98Updated this week
- Python interface for generating coordinate tables and region labels from statistical MRI images☆100Updated 2 weeks ago
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated 2 years ago
- Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.☆36Updated last year
- MarsBaR region of interest toolbox for SPM☆24Updated 5 months ago