WillHua127 / mudiff
☆12Updated last year
Related projects ⓘ
Alternatives and complementary repositories for mudiff
- RetroBridge: Markov Bridge Model for Retrosynthesis Planning☆25Updated 7 months ago
- This is the official implementation for Equivariant Enengy-guided SDE for Inverse Molecule Design (ICLR 2023)☆44Updated last year
- Official implementation of pre-training via denoising for TorchMD-NET☆87Updated last year
- A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining, ICML'23☆31Updated 7 months ago
- Learning Joint 2D & 3D Diffusion Models for Complete Molecule Generation☆40Updated last year
- GeoSSL: Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching, ICLR'23 (https://openreview.net/forum?id=CjTHVo1…☆42Updated last year
- MiDi: Mixed Graph and 3D Denoising Diffusion for Molecule Generation☆89Updated last month
- Implementation of ICML2023 paper : Coarse-to-Fine: a Hierarchical Diffusion Model for Molecule Generation in 3D☆39Updated last year
- Mixed continous/categorical flow-matching model for de novo molecule generation.☆53Updated last week
- Implementation for NeurIPS 2023 paper "Equivariant Flow Matching with Hybrid Probability Transport for 3D Molecule Generation"☆22Updated 5 months ago
- MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation☆40Updated 3 months ago
- ICML2024: Equivariant Graph Neural Operator for Modeling 3D Dynamics☆43Updated 7 months ago
- The official implementation of DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design (ICML 2023)☆51Updated last year
- Implementation of GTMGC: Using Graph Transformer to Predict Molecule’s Ground-State Conformation (ICLR2024 Spotlight).☆15Updated 7 months ago
- [ICLR 2024] MARCEL: Machine Learning over Molecular Conformer Ensembles☆38Updated last year
- The code for "Graph Diffusion Transformer for Multi-Conditional Molecular Generation"☆22Updated 5 months ago
- [ICLR 2024] "Latent 3D Graph Diffusion" by Yuning You, Ruida Zhou, Jiwoong Park, Haotian Xu, Chao Tian, Zhangyang Wang, Yang Shen☆38Updated 4 months ago
- List of Geometric GNNs for 3D atomic systems☆93Updated 8 months ago
- Official code repository for the paper Exploring Chemical Space with Score-based Out-of-distribution Generation (ICML 2023)☆28Updated 5 months ago
- ☆33Updated last year
- Implementation for ICML 2024 paper "MolCRAFT: Structure-Based Drug Design in Continuous Parameter Space"☆69Updated last month
- The official implementation of 3D Equivariant Diffusion for Target-Aware Molecule Generation and Affinity Prediction (ICLR 2023)☆214Updated 10 months ago
- Conditional Diffusion Based on Discrete Graph Structures for Molecular Graph Generation☆30Updated last year
- This repo contains the codes for our paper: Molecule Generation by Principal Subgraph Mining and Assembling.☆32Updated 6 months ago
- [ICLR 2022] The implementation for the paper "Equivariant Graph Mechanics Networks with Constraints".☆58Updated 4 months ago
- [ICLR 2023] "Mole-BERT: Rethinking Pre-training Graph Neural Networks for Molecules"☆102Updated last year
- Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding …☆88Updated 3 months ago
- Papers about Structure-based Drug Design (SBDD)☆82Updated last week
- Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023☆112Updated 5 months ago
- An E(3) Equivariant Variational Autoencoder for Molecular Linker Design☆45Updated 2 years ago