carpentries-incubator / SDC-BIDS-dMRILinks
Introduction to dMRI
☆26Updated this week
Alternatives and similar repositories for SDC-BIDS-dMRI
Users that are interested in SDC-BIDS-dMRI are comparing it to the libraries listed below
Sorting:
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆60Updated last year
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆31Updated last month
- niimath - a clone of fslmaths. Try the live demo:☆70Updated 2 weeks ago
- Introduction to MRI and BIDS☆26Updated this week
- Two days dipy workshop☆11Updated 4 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- A suite of brain PET processing pipelines☆14Updated 10 months ago
- BIDS app wrapping recon-all from FreeSurfer☆43Updated last month
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆33Updated 2 weeks ago
- R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphom…☆74Updated 2 months ago
- APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET …☆42Updated last year
- GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.☆23Updated 2 months ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆43Updated this week
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆46Updated this week
- Structural Neuroimaging Analysis in Python☆32Updated this week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Updated last year
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated last week
- Processing tools for high-resolution neuroimaging☆72Updated 11 months ago
- ☆13Updated 2 years ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆19Updated 7 months ago
- Please visit our new location: https://github.com/tractometry/pyAFQ☆59Updated last year
- normative modelling educational course OHBM24☆28Updated last year
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆31Updated 2 weeks ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆73Updated 3 weeks ago
- Automated Fiber Quantification☆77Updated last year
- Intensity normalization of structural MRIs using RAVEL☆30Updated 2 years ago
- ComBat Family of Harmonization Methods☆25Updated 2 months ago
- Preprocessing of diffusion MRI☆167Updated last week
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆55Updated last week
- ☆39Updated 3 years ago