Alternatives and similar repositories for MDVoxelSegmentation:

Users that are interested in MDVoxelSegmentation are comparing it to the libraries listed below

• MikkelDA / COBY
  COBY (Coarse Grained System Builder) can be used to create coarse-grained systems in Martini 3
  ☆29Updated last month
• weria-pezeshkian / TS2CG-v2.0
  TS2CG version 2
  ☆12Updated last week
• gph82 / mdciao
  mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data
  ☆33Updated this week
• wlsong / PyLipID
  A python toolkit for analysing membrane protein-lipid interactions.
  ☆63Updated 2 years ago
• maxscheurer / pycontact
  Analysis of non-covalent interactions in MD trajectories
  ☆56Updated 4 months ago
• dkoes / md-scripts
  A collections of scripts for working molecular dynamics simulations
  ☆43Updated 11 months ago
• RMeli / spyrmsd
  📐 Symmetry-corrected RMSD in Python
  ☆98Updated this week
• ghorbanimahdi73 / GraphVampNet
  ☆15Updated 3 years ago
• noegroup / reform
  A simple implementation of replica exchange MD simulations for OpenMM.
  ☆23Updated 3 years ago
• KULL-Centre / CALVADOS
  ☆59Updated this week
• maccallumlab / martini_openmm
  ☆54Updated 2 years ago
• openmm / openmm_workshops
  ☆35Updated 8 months ago
• osmart / hole2
  Source code for HOLE program.
  ☆35Updated 8 months ago
• Psivant / femto
  A comprehensive toolkit for predicting free energies
  ☆52Updated 4 months ago
• OpenFreeEnergy / cinnabar
  Package for consistent reporting of relative free energy results
  ☆39Updated last week
• aethertier / secstructartist
  A python module to plot secondary structure schemes
  ☆25Updated last year
• OpenFreeEnergy / ExampleNotebooks
  Notebooks demonstrating how to do simple tasks related to free energy calculations.
  ☆42Updated this week
• choderalab / espaloma-charge
  Standalone charge assignment from Espaloma framework.
  ☆39Updated 9 months ago
• MDAnalysis / membrane-curvature
  MDAnalysis tool to calculate membrane curvature.
  ☆32Updated 8 months ago
• MDAnalysis / MDAKits
  The MDAnalysis Toolkits Registry
  ☆17Updated last week
• fjclark / red
  Robust Equilibration Detection
  ☆22Updated 2 weeks ago
• lilyminium / psiresp
  RESP with inter- and intra-molecular constraints in Psi4.
  ☆31Updated last year
• openforcefield / ccpbiosim-2023
  Materials for 2023 workshop at CCPBioSim Training Week https://www.ccpbiosim.ac.uk/events/upcoming-events/eventdetail/104/-/training-week
  ☆30Updated last year
• owenvickery / cg2at
  Conversion of coarsegrain to atomistic (complete rewrite of the original CG2AT)
  ☆31Updated 9 months ago
• BartBruininks / mdvwhole
  Density based object completion over PBC.
  ☆29Updated 5 months ago
• openmm / openmm-plumed
  OpenMM plugin to interface with PLUMED
  ☆66Updated 2 months ago
• MiaoLab20 / gamd-openmm
  Gaussian Accelerated Molecular Dynamics (GaMD) is a computational method for both unconstrained enhanced sampling and free energy calcula…
  ☆81Updated 2 weeks ago
• fmaschietto / mdigest
  ☆31Updated 6 months ago
• MayLab-UConn / BUMPy
  ☆25Updated 3 years ago
• VTX-Molecular-Visualization / VTX
  ☆38Updated 3 weeks ago