MemSurfer is a software tool to compute bilayer membrane surfaces.
☆27May 23, 2024Updated last year
Alternatives and similar repositories for MemSurfer
Users that are interested in MemSurfer are comparing it to the libraries listed below
Sorting:
- Main code repository for FATSLiM☆23Feb 13, 2022Updated 4 years ago
- Scripts for PCA and related analyses of lipid motions☆10Jun 21, 2022Updated 3 years ago
- A Python toolkit for the analyis of lipid membrane simulations☆34Oct 24, 2025Updated 4 months ago
- MDAnalysis tool to calculate membrane curvature.☆35Jul 25, 2025Updated 7 months ago
- Simple library for reading trajectory coordinates☆18Oct 5, 2016Updated 9 years ago
- ☆26Jan 20, 2022Updated 4 years ago
- Optimization tool for calibrating coarse-grained force fields of lipids, relying on the simultaneous usage of reference AA trajectories (…☆10Jun 6, 2023Updated 2 years ago
- Deep Supervised Graph Partitioning Model☆14Aug 3, 2021Updated 4 years ago
- A fully GPU-accelerated molecular dynamics program for the Martini force field☆35Sep 13, 2023Updated 2 years ago
- Automatic Mutual Information Noise Omission☆16Oct 8, 2024Updated last year
- Python package to construct free energy profiles from biased molecular simulation data using both log-likelihood maximization and self-co…☆21Jun 27, 2024Updated last year
- Quickly generate, start and analyze benchmarks for molecular dynamics simulations.☆80Sep 5, 2024Updated last year
- ☆21Aug 16, 2019Updated 6 years ago
- Fast PBC wrapping and unwrapping for VMD☆24Nov 25, 2024Updated last year
- GridMAT-MD membrane analysis program☆25Sep 15, 2018Updated 7 years ago
- (outdated) fork of https://gitlab.com/gromacs/gromacs☆53Apr 27, 2023Updated 2 years ago
- ☆62Dec 10, 2025Updated 2 months ago
- Density based object completion over PBC.☆30Dec 10, 2024Updated last year
- Parallel algorithms for MDAnalysis☆31Aug 2, 2024Updated last year
- Describe and apply transformation on molecular structures and topologies☆139Updated this week
- Using supervised machine learning to build collective variables for accelerated sampling☆28Jun 26, 2018Updated 7 years ago
- INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems☆76Apr 11, 2024Updated last year
- 该项目主要功能为对受到成像设备及环境噪声干扰影响导致图像模糊及产生噪声干扰的图片进行修复。项目创建一个搭载在网页端的图像修复系统,用户将需要修复的图像上传到系统,系统经过处理后向用户输出修复的图片。项目基于CNN卷积神经网络,使用大量的数据集进行训练,从而优化处理能力,最终…☆14Jan 11, 2024Updated 2 years ago
- TS2CG: Conversion of triangulated surfaces to (coarse grain) membrane models for molecular simulation☆32Apr 17, 2025Updated 10 months ago
- Automatic MARTINI parametrization of small organic molecules☆72May 28, 2025Updated 9 months ago
- Read cardiac electrophysiology maps from various electroanatomic mapping systems into 3D Slicer☆12Oct 9, 2022Updated 3 years ago
- Create coarse grain Martini input files for Gromacs from (atomistic) pdb files.☆40Nov 2, 2022Updated 3 years ago
- VMD Plugin and associated scripts to build lignin structures from topological specifications☆17Jul 17, 2025Updated 7 months ago
- pix2pix and Cycle GAN architectures for image style transfer☆13May 27, 2021Updated 4 years ago
- a logistics and persistence engine for the analysis of molecular dynamics trajectories☆30Jan 24, 2020Updated 6 years ago
- MD pharmacophores and virtual screening☆34Dec 15, 2023Updated 2 years ago
- persistent, pythonic trees for heterogeneous data☆33May 20, 2022Updated 3 years ago
- Gromacs to Lammps simulation converter☆90Dec 9, 2023Updated 2 years ago
- Mouse grooming neural network training and inference code for single mice in open field assays.☆10Mar 29, 2021Updated 4 years ago
- ☆16May 4, 2022Updated 3 years ago
- ☆12Jan 23, 2024Updated 2 years ago
- 基于OpenCV深度学习神经网络人脸模块(OpenCV DNN Face)的实时人脸识别程序☆14Mar 7, 2023Updated 2 years ago
- Batch Bayesian Optimization within the Model Reification and Fusion Framework☆10Oct 8, 2021Updated 4 years ago
- Spiking neural network simulator based on memrisor characteristics☆16Updated this week