kdd-ubc / MorphOT
Transport-based interpolation of cryo-EM density maps for ChimeraX
☆10Updated 3 years ago
Alternatives and similar repositories for MorphOT:
Users that are interested in MorphOT are comparing it to the libraries listed below
- Plugin to UCSF Chimera for segmenting Cryo-EM density maps☆11Updated 3 months ago
- ☆13Updated 3 weeks ago
- CryoSPARC is the state-of-the-art platform used globally for obtaining 3D structural information from single particle cryo-EM data. The …☆14Updated 4 months ago
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆33Updated last week
- Tools for user-free preprocessing of cryo-EM datasets☆26Updated 2 years ago
- cryoID identifies the protein(s) in unknown near-atomic resolution cryoEM density maps from a pool of candidate proteins.☆13Updated 5 years ago
- ☆17Updated 8 months ago
- MapQ is a plugin for UCSF Chimera to calculate Q-scores of an atomic model in a cryoEM map.☆13Updated 2 months ago
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆33Updated last year
- CryoET Data Portal☆22Updated this week
- Cryo-EM data viewer in napari☆14Updated 4 years ago
- A new repository (with deleted history) in preparation for release 3.0 of SIMPLE☆24Updated this week
- repository of notebooks for cryoEM☆13Updated 5 years ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆25Updated 3 months ago
- Scripts for using the Relion package for single particle cryo-electron microscopy (cryo-EM)☆26Updated 5 years ago
- qFit: Automated and unbiased multi-conformer models from X-ray and EM maps.☆40Updated last week
- Very simple script for EPU users which adds beam tilt classes to the star file☆11Updated last year
- Rigid body fitting of atomic strucures in cryo-electron microscopy density maps☆20Updated 4 months ago
- Contextual Analysis Tools for cryoET and subtomogram averaging☆24Updated this week
- macromolecular structure files (.pdb/.mmCIF) as pandas DataFrames☆8Updated 3 months ago
- Transformer And Rapid Dimensionless Instance Segmentation☆11Updated 2 weeks ago
- Simulation of cryo-EM ensemble data from atomic models of molecules exhibiting continuous motions☆14Updated 3 years ago
- IMOD model files as pandas dataframes in Python☆11Updated last month
- From cryo-EM density map to atomic structure☆27Updated 3 months ago
- Phantom generator☆19Updated last week
- Tools for interfacing between cryoSPARC and Relion☆17Updated last year
- GPU accelerating computing for Bayesian inference of electron microscopy images. BioEM is a publicly available software that enables the …☆11Updated last year
- Conventions for 3DEM software packages☆19Updated 3 years ago
- ☆13Updated 2 months ago
- Makes RELION 3.1 Optics Groups from EPU AFIS data☆17Updated last year