Alternatives and similar repositories for cryoEM-notebooks

Users that are interested in cryoEM-notebooks are comparing it to the libraries listed below

• ml-struct-bio / cryofire
  Amortized inference for ab initio heterogeneous cryo-EM reconstruction
  ☆37Updated 2 years ago
• Guillawme / cryoEM-scripts
  Utilities to help cryoEM data analysis
  ☆20Updated 4 years ago
• czimaginginstitute / AreTomo3
  Live processing and real time reconstruction of cryo
  ☆28Updated last month
• dkimanius / sbackprop
  Sparse Fourier Backpropagation in Cryo-EM Reconstruction
  ☆12Updated last year
• cianfrocco-lab / Automatic-cryoEM-preprocessing
  Tools for user-free preprocessing of cryo-EM datasets
  ☆26Updated 2 years ago
• zhonge / cryodrgn_empiar
  ☆30Updated 4 years ago
• ma-gilles / recovar
  ☆33Updated this week
• dtegunov / warp
  ☆16Updated 8 years ago
• 3dem / DynaMight
  Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset
  ☆27Updated 6 months ago
• ml-struct-bio / drgnai
  ☆31Updated 8 months ago
• timothygrant80 / cisTEM
  ☆39Updated 3 weeks ago
• wan-lab-vanderbilt / TOMOMAN
  A set of MATLAB wrapper scripts to help with pre-processing of tomography data.
  ☆19Updated 9 months ago
• turonova / cryoCAT
  Contextual Analysis Tools for cryoET and subtomogram averaging
  ☆29Updated this week
• teamtomo / starfile
  STAR file I/O in Python
  ☆51Updated 3 weeks ago
• phonchi / Computational-CryoET
  A curated list of awesome computational cryo-ET methods.
  ☆60Updated 8 months ago
• evanseitz / ManifoldEM_Python
  ManifoldEM Python suite
  ☆16Updated 7 months ago
• MPI-Dortmund / tomotwin-cryoet
  cryo-ET particle picking by representation and metric learning
  ☆36Updated last week
• turonova / novaCTF
  3D-CTF correction for cryo-electron tomography
  ☆26Updated 6 years ago
• azazellochg / 3DEM-conventions
  Conventions for 3DEM software packages
  ☆19Updated 3 years ago
• bpowell122 / tomodrgn
  Neural networks to analyze structural heterogeneity in cryo-electron sub-tomograms
  ☆28Updated 5 months ago
• alncat / opusDSD
  deep structural disentanglement
  ☆38Updated 2 months ago
• compSPI / cryoAI
  ☆43Updated last year
• phonchi / Computational-CryoEM
  A curated list of awesome computational cryo-EM methods.
  ☆126Updated 3 months ago
• SBC-Utrecht / PyTom
  PyTom software for cryo-tomogram processing
  ☆42Updated 2 months ago
• mxhulab / cryosieve
  ☆43Updated 3 months ago
• czimaginginstitute / GCtfFind
  GPU accelerated software package for CTF estimation of cryoEM micrographs and cryoET tilt series
  ☆23Updated last month
• geoffwoollard / learn_cryoem_math
  ☆123Updated last week
• anmartinezs / pyseg_system
  De novo analysis for cryo-electron tomography
  ☆21Updated 7 months ago
• alisterburt / dynamo2m
  a bidirectional interface between Dynamo and the Warp-RELION-M pipeline
  ☆18Updated last year
• bionanopatterning / Ais
  ☆17Updated 3 weeks ago