imzhangyd / MoTT
MoTT is the official repository of the paper "A Motion Transformer for Single Particle Tracking in Fluorescence Microscopy Images".
☆12Updated 9 months ago
Alternatives and similar repositories for MoTT
Users that are interested in MoTT are comparing it to the libraries listed below
Sorting:
- Repository for the publication "Denoising Diffusion Probabilistic Models for Generation of Realistic Fully-Annotated Microscopy Image Dat…☆37Updated last year
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆94Updated this week
- ☆67Updated 2 weeks ago
- Semi-Supervised Neuron Segmentation via Reinforced Consistency Learning☆31Updated 2 years ago
- Domain Adaptive Mitochondria Segmentation via Enforcing Inter-Section Consistency☆16Updated last year
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆24Updated 2 years ago
- ☆37Updated last year
- [SegRap2023&MedIA2025]A challenge about organ-at-risk and gross-tumor-volume segmentation in adaptive radiotherapy hosted on MICCAI2023.☆26Updated 2 months ago
- Official implementation, datasets and trained models of "SegNeuron: 3D Neuron Instance Segmentation in Any EM Volume with a Generalist Mo…☆12Updated 3 months ago
- StarDist PyTorch☆47Updated 2 years ago
- DeeperHistReg - Source Code☆59Updated last year
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆148Updated this week
- A comprehensive list of papers on learning-based image registration, as well as python implementation of various loss functions and evalu…☆80Updated 3 months ago
- official implementation of paper "Unsupervised Multi-Modal Medical Image Registration via Discriminator-Free Image-to-Image Translation"☆48Updated 3 years ago
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆70Updated 3 years ago
- A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.☆55Updated last week
- Segment Anything for Medical Imaging☆19Updated this week
- 3D airway segmentation method☆60Updated 3 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆47Updated 11 months ago
- python, pytorch, torch_geometric☆9Updated 3 years ago
- SVoRT: Iterative Transformer for Slice-to-Volume Registration in Fetal Brain MRI☆41Updated 2 years ago
- [ISBI 2024] An implementation of SAM3D which adapts Segment Anything Model for Volumetric Medical Image Segmentation☆65Updated 11 months ago
- Tool for robust segmentation of >100 important anatomical structures in CT images☆12Updated last year
- Segmented anisotropic ssTEM dataset of neural tissue☆24Updated 11 years ago
- Large Medical Image Foundation Model☆17Updated last year
- NaviAirway: a Bronchiole-sensitive Deep Learning-based Airway Segmentation Pipeline☆51Updated 2 years ago
- Unsupervised Instance Segmentation in Microscopy☆23Updated last year
- [CVPR2024 🏆 Best Paper Candidate] CorrMLP: Correlation-aware MLP-based networks for deformable medical image registration☆71Updated 2 months ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- Automated prediction of treatment effectiveness in ovarian cancer using histopathological images☆13Updated 8 months ago