ihmeuw / vivarium
A python microsimulation framework
☆45Updated this week
Related projects ⓘ
Alternatives and complementary repositories for vivarium
- Vivarium microsimulation tools used to model diseases and interventions.☆21Updated this week
- Miscellaneous tools for data analysis and scientific computing☆37Updated 3 months ago
- Data and code for COVID-19 NPI effectiveness estimation.☆30Updated 3 years ago
- ☆19Updated last year
- HTTP interface to Stan, a package for Bayesian inference.☆40Updated 4 months ago
- Utility to generate plots with categorical variables using Altair.☆25Updated 6 years ago
- Good Enough Practices in Scientific Computing☆17Updated this week
- pybroom, the python's broom to tidy up messy fit results!☆14Updated 7 years ago
- MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture…☆13Updated 3 months ago
- R package to visualize mapping structures of random forests with feature contributions☆42Updated 3 years ago
- Tool for exploring probability distributions.☆24Updated 6 months ago
- An interactive visualization tool that transforms probabilistic programming models into an "Interactive Probabilistic Models Explorer".☆24Updated 5 months ago
- 'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)☆64Updated 4 years ago
- Database of journal policies: TRANsparency in Scholarly Publishing for Open Scholarship Evolution☆20Updated 3 years ago
- Formulas for mixed-effects models in Python☆56Updated last month
- python convenience functions for working with Stan models (via pystan)☆13Updated 6 years ago
- UpSet - Visualizing Intersecting Sets☆56Updated this week
- A surface language for programming Stan models using python syntax☆46Updated 5 years ago
- ODE modelling in Python☆27Updated 2 months ago
- Library of Stan Models for Survival Analysis☆123Updated 4 years ago
- Template for RStudio on Binder / JupyterHub☆69Updated 2 years ago
- A `select` accessor for easier subsetting of pandas DataFrames and Series☆34Updated last year
- Conventionally parameterized probability distributions☆35Updated last month
- The Public FRED Repository☆74Updated 6 months ago
- Toolbox for non-linear calibration modeling.☆24Updated last month
- A fast C++ API for simulating the spread of epidemics on contact networks.☆41Updated last year
- Scenario analyses for COVID-19 outbreak in the United Kingdom☆64Updated 4 years ago
- Reproducibility case study contributions☆31Updated 7 years ago
- Variable importance through targeted causal inference, with Alan Hubbard☆57Updated last year
- A cookbook of epidemiological models☆13Updated 5 years ago