helboukkouri / acl_srw_2019
This is the code for reproducing the experiments from "Embedding Strategies for Specialized Domains: Application to Clinical Entity Recognition" (El Boukkouri et al.)
☆7Updated 5 years ago
Alternatives and similar repositories for acl_srw_2019:
Users that are interested in acl_srw_2019 are comparing it to the libraries listed below
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- Implementation of the BLUE benchmark with Transformers.☆20Updated last year
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆68Updated 3 years ago
- Relation Extraction with Semeval 2010 data, i2b2 2010 VA challenge classification data and DDI extraction data.☆19Updated 5 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆41Updated 4 years ago
- Repository used to collect biomedical corpus on the Internet!☆32Updated 4 years ago
- Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019☆51Updated 2 years ago
- BioELECTRA☆51Updated 3 years ago
- ☆10Updated 3 years ago
- Code and supplementary material for the HealthINF conference paper☆13Updated 4 years ago
- ☆25Updated last year
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "End-…☆91Updated 5 years ago
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 2 years ago
- ☆57Updated 3 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- ECIR 2020 - MedLinker: Medical Entity Linking with Neural Representations and Dictionary Matching☆29Updated last year
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 10 months ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 4 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.☆35Updated 4 years ago
- A fine-tuned BERT using EHR notes.☆14Updated 5 years ago
- BioBert Pytorch☆116Updated 2 years ago
- Code for AttentionMeSH☆17Updated 6 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- Joint sentence classification-Tensorflow☆33Updated 6 years ago
- Generate-and-Rank Framework with Semantic Type Regularization for Biomedical Concept Normalization☆25Updated 4 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- Multitask Learning with Pretrained Transformers☆39Updated 3 years ago
- The medical question entailment data introduced in the AMIA 2016 Paper (Recognizing Question Entailment for Medical Question Answering)☆14Updated 2 years ago