fithisux / FSL
Source code for FSL: http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/
☆15Updated 8 years ago
Related projects ⓘ
Alternatives and complementary repositories for FSL
- Preprocessing of diffusion MRI☆140Updated this week
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆83Updated 5 months ago
- Fast brain extraction using neural networks☆24Updated 4 months ago
- Multi-site dMRI harmonization☆46Updated 10 months ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆62Updated this week
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆23Updated last year
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆72Updated 3 years ago
- Segmentation of the thalamus into 11 nuclei and MTT using white-matter-nulled MPRAGE MRI image contrast with support now for standard MPR…☆23Updated 5 months ago
- MR to CT for TUS acoustic simulations☆23Updated 3 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆64Updated 11 months ago
- Scripts to prepare MP2RAGE for Freesurfer☆23Updated last year
- defacing utility for MRI images☆112Updated 10 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆60Updated 4 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆57Updated last week
- The TemplateFlow Archive - A DataLad super-dataset☆72Updated 7 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆61Updated this week
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆97Updated 2 months ago
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆90Updated 2 weeks ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆49Updated 2 years ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆90Updated this week
- Preprocessing of arterial spin labeling (ASL) data☆41Updated this week
- ☆24Updated 6 months ago
- Easylearn is designed for machine learning mainly in resting-state fMRI, radiomics and other fields (such as EEG). Easylearn is built on …☆36Updated last year
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/e…☆34Updated last month
- ☆29Updated 11 months ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆74Updated this week
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆25Updated 7 months ago
- KUL/UZ NeuroImaging Suite. A set of tools for brain and spine MRI analysis.☆15Updated last month
- DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning☆19Updated last month
- A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!☆85Updated 2 years ago