fides-dev / fidesLinks
Trust Region Optimization in Python
☆28Updated last week
Alternatives and similar repositories for fides
Users that are interested in fides are comparing it to the libraries listed below
Sorting:
- python Parameter EStimation TOolbox☆262Updated this week
- High-performance sensitivity analysis for large ordinary differential equation models☆127Updated this week
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆60Updated last week
- Python wrapper around cvodes (from the sundials library)☆35Updated 2 months ago
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆22Updated 9 months ago
- Model selection for PEtab☆13Updated 2 months ago
- ☆100Updated last month
- A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existin…☆28Updated this week
- Leveraging numba to speed up ODE integration☆73Updated last month
- A Python toolkit for coordinating asynchronous and dynamic ensembles of calculations.☆72Updated this week
- A derivative-free solver for general nonlinear optimization.☆51Updated 8 months ago
- Python wrapper of LSODA (solving ODEs) which can be called from within numba functions.☆100Updated 2 years ago
- distributed, likelihood-free inference☆217Updated 4 months ago
- Powell's Derivative-Free Optimization solvers.☆107Updated 6 months ago
- Just-in-Time Compilation for Ordinary Differential Equations☆68Updated 4 months ago
- Design of experiments for Python☆48Updated 2 weeks ago
- Numerical derivatives for Python☆50Updated this week
- Solve ODEs fast, with support for PyMC☆117Updated last year
- Optimal numerical differentiation of noisy time series data in python.☆66Updated 4 months ago
- Gaussian random variables.☆32Updated 4 months ago
- PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.☆26Updated 5 years ago
- PyGSL is a Python wrapper for the GNU Scientific Library (GSL).☆36Updated 2 weeks ago
- Python wrapper for Intel Math Kernel Library (MKL) matrix multiplication☆91Updated 3 weeks ago
- UM-Bridge (the UQ and Model Bridge) provides a unified interface for numerical models that is accessible from virtually any programming l…☆38Updated last week
- Python-based Derivative-Free Optimizer for Least-Squares☆42Updated 3 weeks ago
- Workshop tutorials for Pyomo.DoE☆13Updated 5 months ago
- Numerically solve the Fokker-Planck equation in N dimensions☆95Updated last month
- ∫ Straightforward numerical integration of systems of ordinary differential equations☆96Updated 2 months ago
- Python wrapper around odeint (from the boost C++ library)☆20Updated 3 months ago
- Solve symbolically defined systems of non-linear equations numerically.☆52Updated 2 months ago