fides-dev / fidesLinks
Trust Region Optimization in Python
☆27Updated 2 years ago
Alternatives and similar repositories for fides
Users that are interested in fides are comparing it to the libraries listed below
Sorting:
- High-performance sensitivity analysis for large ordinary differential equation models☆124Updated last week
- python Parameter EStimation TOolbox☆250Updated last week
- PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology☆60Updated last week
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆22Updated 5 months ago
- PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.☆26Updated 5 years ago
- A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existin…☆29Updated 2 weeks ago
- Design of experiments for Python☆38Updated 3 weeks ago
- Model selection for PEtab☆12Updated 5 months ago
- ☆99Updated last year
- Python wrapper around cvodes (from the sundials library)☆35Updated 2 weeks ago
- Powell's Derivative-Free Optimization solvers.☆103Updated 3 months ago
- A derivative-free solver for general nonlinear optimization.☆49Updated 4 months ago
- Leveraging numba to speed up ODE integration☆73Updated last year
- A project to package the NLOpt library to wheels☆31Updated 6 months ago
- Methods for numerical differentiation of noisy data in python☆120Updated last week
- a collection of modern sparse (regularized) linear regression algorithms.☆64Updated 5 years ago
- Solve ODEs fast, with support for PyMC☆114Updated last year
- Modeling toolkit for biochemical simulation☆75Updated 6 months ago
- Python wrapper of LSODA (solving ODEs) which can be called from within numba functions.☆98Updated 2 years ago
- Python-based Derivative-Free Optimizer for Least-Squares☆42Updated 5 months ago
- Stiff Neural Ordinary Differential Equations☆34Updated 2 years ago
- distributed, likelihood-free inference☆216Updated last month
- Python library for parallel multiobjective simulation optimization☆82Updated 11 months ago
- A software package for flexible HPC GPs☆16Updated last month
- Python wrapper around odeint (from the boost C++ library)☆20Updated 2 weeks ago
- ∫ Straightforward numerical integration of systems of ordinary differential equations☆95Updated 2 weeks ago
- Just-in-Time Compilation for Ordinary Differential Equations☆67Updated 3 weeks ago
- StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks☆41Updated last month
- A Python toolkit for coordinating asynchronous and dynamic ensembles of calculations.☆70Updated last week
- Numerically solve the Fokker-Planck equation in N dimensions☆91Updated last year