Trust Region Optimization in Python
☆28Nov 11, 2025Updated 5 months ago
Alternatives and similar repositories for fides
Users that are interested in fides are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existin…☆32Mar 31, 2026Updated last week
- Tool to convert an ODE model specified in the YAML format to SBML.☆12Jun 13, 2023Updated 2 years ago
- High-performance sensitivity analysis for large ordinary differential equation models☆136Mar 31, 2026Updated last week
- python Parameter EStimation TOolbox☆269Apr 4, 2026Updated last week
- Create parameter estimation problems for ODE models☆69Mar 28, 2026Updated last week
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML☆27Mar 13, 2023Updated 3 years ago
- Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.☆21Dec 15, 2025Updated 3 months ago
- Create nice documentation for your MatLab project using doxygen☆15Jul 14, 2019Updated 6 years ago
- The SBML Test Suite is a conformance testing system. It allows developers and users to test the degree and correctness of the SBML suppor…☆26Dec 3, 2025Updated 4 months ago
- An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuris…☆24Updated this week
- Crypto ticker and graph for the Pimoroni InkyPHAT display☆10Feb 27, 2024Updated 2 years ago
- source code for VESAEA, paper in CEC2019☆10Mar 27, 2019Updated 7 years ago
- Julia Catalyst.jl importers for various reaction network file formats like BioNetGen and stoichiometry matrices☆27Updated this week
- PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.☆27Mar 2, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Accelerating Bayesian reaction optimization with limited data☆12Aug 5, 2023Updated 2 years ago
- ☆20May 28, 2024Updated last year
- Reaction Analysis through Imaging of Chemical Units☆16Dec 5, 2025Updated 4 months ago
- Measure, display and log temperatures with Raspberry PI☆14May 31, 2024Updated last year
- ☆12Mar 17, 2025Updated last year
- Automated C Code Generation for Use with the 'deSolve' and 'bvpSolve' Packages☆11Mar 27, 2026Updated 2 weeks ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆11May 16, 2023Updated 2 years ago
- Chemios Framework 👨🏾🔬: Accelerating Science through Automation☆36Dec 10, 2021Updated 4 years ago
- Interactive tutorials and documentation for file based Python interface.☆12Mar 21, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Ontology of algorithms for analyzing biological models, their parameters, and their outputs☆11Mar 31, 2026Updated last week
- A suite of chromatography programms: Breakthrough curve modelling, isotherm determination, parameters fitting...☆14Jun 15, 2023Updated 2 years ago
- KVXOPT -- Python Software for Convex Optimization containing more wrappers suite-sparse.☆13Feb 22, 2026Updated last month
- ☆18Mar 22, 2026Updated 2 weeks ago
- Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits☆11Jun 2, 2021Updated 4 years ago
- The extension for Sphinx documentation projects that handles redirects for moved pages. Based on the its configuration, the extension gen…☆16Feb 27, 2026Updated last month
- GenSSI 2.0 - Generating Series for testing Structural Identifiability