Alternatives and similar repositories for fides

Users that are interested in fides are comparing it to the libraries listed below

• AMICI-dev / AMICI
  High-performance sensitivity analysis for large ordinary differential equation models
  ☆125Updated last week
• ICB-DCM / pyPESTO
  python Parameter EStimation TOolbox
  ☆261Updated last week
• PEtab-dev / PEtab
  PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
  ☆60Updated this week
• relf / pyDOE3
  Design of experiments for Python
  ☆42Updated last week
• bjodah / pycvodes
  Python wrapper around cvodes (from the sundials library)
  ☆35Updated last month
• PEtab-dev / petab_select
  Model selection for PEtab
  ☆13Updated last month
• Benchmarking-Initiative / Benchmark-Models-PEtab
  A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existin…
  ☆28Updated last month
• equadratures / equadratures
  ☆100Updated 2 years ago
• ICB-DCM / parPE
  Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.
  ☆22Updated 7 months ago
• cobyqa / cobyqa
  A derivative-free solver for general nonlinear optimization.
  ☆51Updated 6 months ago
• dyscolab / numbakit-ode
  Leveraging numba to speed up ODE integration
  ☆73Updated 2 weeks ago
• Ohjeah / sparsereg
  a collection of modern sparse (regularized) linear regression algorithms.
  ☆65Updated 5 years ago
• pdfo / pdfo
  Powell's Derivative-Free Optimization solvers.
  ☆105Updated 5 months ago
• ICB-DCM / pyABC
  distributed, likelihood-free inference
  ☆217Updated 3 months ago
• pymc-devs / sunode
  Solve ODEs fast, with support for PyMC
  ☆117Updated last year
• andgoldschmidt / derivative
  Optimal numerical differentiation of noisy time series data in python.
  ☆65Updated 3 months ago
• neurophysik / jitcode
  Just-in-Time Compilation for Ordinary Differential Equations
  ☆68Updated 2 months ago
• Nicholaswogan / numbalsoda
  Python wrapper of LSODA (solving ODEs) which can be called from within numba functions.
  ☆100Updated 2 years ago
• parmoo / parmoo
  Python library for parallel multiobjective simulation optimization
  ☆83Updated last year
• florisvb / PyNumDiff
  Methods for numerical differentiation of noisy data in python
  ☆123Updated this week
• StochSS / GillesPy2
  Modeling toolkit for biochemical simulation
  ☆79Updated 8 months ago
• numericalalgorithmsgroup / dfols
  Python-based Derivative-Free Optimizer for Least-Squares
  ☆42Updated 3 weeks ago
• HDembinski / jacobi
  Numerical derivatives for Python
  ☆49Updated this week
• SystemsBioinformatics / stochpy
  StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks
  ☆42Updated 3 months ago
• Libensemble / libensemble
  A Python toolkit for coordinating asynchronous and dynamic ensembles of calculations.
  ☆71Updated this week
• ICB-DCM / PESTO
  PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.
  ☆26Updated 5 years ago
• ashleefv / ApplNumComp
  Applied Numerical Computing Course
  ☆29Updated 5 months ago
• DENG-MIT / StiffNeuralODE
  Stiff Neural Ordinary Differential Equations
  ☆35Updated 2 years ago
• bmcage / odes
  The ODES scikit for ordinary differential and algebraic equations, an extension to scipy
  ☆128Updated 8 months ago
• kb-press / ndsplines
  Multi-dimensional B-splines
  ☆33Updated last week