Alternatives and similar repositories for UniMAP

Users that are interested in UniMAP are comparing it to the libraries listed below

• zaixizhang / FLAG
  Implementation of ICLR23 paper "Molecule Generation for Target Protein Binding with Structural Motifs"
  ☆69Updated last year
• yuewan2 / Retroformer
  ☆48Updated 3 years ago
• dual-view-molecule-pretraining / dmp
  ☆11Updated 4 years ago
• YangLing0818 / IRDiff
  [ICML 2024] Interaction-based Retrieval-augmented Diffusion Models for Protein-specific 3D Molecule Generation
  ☆33Updated 11 months ago
• fengshikun / FradNMI
  ☆24Updated 7 months ago
• AI-HPC-Research-Team / GIT-Mol
  A Multi-modal Large Language Model for Molecular Science with Graph, Image, and Text
  ☆32Updated 2 months ago
• LirongWu / Prompt-DDG
  Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…
  ☆42Updated 10 months ago
• YangLing0818 / IPDiff
  [ICLR 2024] Protein-Ligand Interaction Prior for Binding-aware 3D Molecule Diffusion Models
  ☆51Updated 11 months ago
• myprecioushh / ZeroBind
  ☆25Updated last year
• QizhiPei / SSM-DTA
  SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)
  ☆53Updated last year
• zaixizhang / Awesome-SBDD
  Papers about Structure-based Drug Design (SBDD)
  ☆120Updated 8 months ago
• chao1224 / GeoSSL
  GeoSSL: Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching, ICLR'23 (https://openreview.net/forum?id=CjTHVo1…
  ☆47Updated 2 years ago
• junxia97 / Mole-BERT
  [ICLR 2023] "Mole-BERT: Rethinking Pre-training Graph Neural Networks for Molecules"
  ☆124Updated 2 years ago
• tencent-ailab / MDM
  MDM
  ☆55Updated last year
• Vencent-Won / SGGRL
  The implementation of the paper "Multi-Modal Representation Learning for Molecular Property Prediction: Sequence, Graph, Geometry".
  ☆43Updated 8 months ago
• smiles724 / ProtMD
  ☆64Updated 2 months ago
• bowen-gao / DrugCLIP
  [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening
  ☆103Updated last year
• GenSI-THUAIR / MolCRAFT
  Official repository for MolCRAFT series
  ☆114Updated last month
• pengxingang / MolDiff
  MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation
  ☆65Updated last year
• KyGao / ABGNN
  PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"
  ☆53Updated last year
• jinhojsk515 / SPMM
  [Nat. Comm. 2024] Multimodal learning for chemical domain, with SMILES and properties.
  ☆39Updated 7 months ago
• microsoft / DVMP
  The official implementation of dual-view molecule pre-training.
  ☆42Updated 3 years ago
• Layne-Huang / PMDM
  ☆139Updated last month
• Rich-XGK / GTMGC
  Implementation of GTMGC: Using Graph Transformer to Predict Molecule’s Ground-State Conformation (ICLR2024 Spotlight).
  ☆17Updated last year
• HongxinXiang / ImageMol
  ImageMol is a molecular image-based pre-training deep learning framework for computational drug discovery.
  ☆54Updated 6 months ago
• uta-smile / RetroXpert
  ☆64Updated 4 years ago
• MIRALab-USTC / AI4Sci-MiCaM
  This is the code of paper "De Novo Molecular Generation via Connection-aware Motif Mining". Zijie Geng, Shufang Xie, Yingce Xia, Lijun Wu…
  ☆56Updated 7 months ago
• GT4SD / multitask_text_and_chemistry_t5
  Code for "Unifying Molecular and Textual Representations via Multi-task Language Modelling" @ ICML 2023
  ☆41Updated 11 months ago
• LirongWu / PSC-CPI
  Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…
  ☆28Updated 6 months ago
• phenixace / MolReGPT
  ☆51Updated last year