fengshikun / FradLinks
This is the official implementation of the paper: Fractional Denoising for 3D Molecular Pre-training
☆22Updated last year
Alternatives and similar repositories for Frad
Users that are interested in Frad are comparing it to the libraries listed below
Sorting:
- ☆26Updated 10 months ago
- Official implementation of pre-training via denoising for TorchMD-NET☆98Updated 2 years ago
- Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023☆130Updated last year
- Official repository for MolCRAFT series☆135Updated 2 months ago
- MDM☆56Updated last year
- GeoSSL: Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching, ICLR'23 (https://openreview.net/forum?id=CjTHVo1…☆47Updated 2 years ago
- ☆96Updated 6 months ago
- MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation☆79Updated last year
- Papers about Structure-based Drug Design (SBDD)☆137Updated 3 months ago
- The code for "Graph Diffusion Transformer for Multi-Conditional Molecular Generation"☆100Updated 6 months ago
- [AAAI 2023] The implementation for the paper "Energy-Motivated Equivariant Pretraining for 3D Molecular Graphs"☆33Updated last year
- Implementation of ICLR23 paper "Molecule Generation for Target Protein Binding with Structural Motifs"☆70Updated last year
- [ICLR 2024] Protein-Ligand Interaction Prior for Binding-aware 3D Molecule Diffusion Models☆53Updated last year
- Implementation of GTMGC: Using Graph Transformer to Predict Molecule’s Ground-State Conformation (ICLR2024 Spotlight).☆19Updated last year
- ImageMol is a molecular image-based pre-training deep learning framework for computational drug discovery.☆56Updated 10 months ago
- Implementation of ICML2023 paper : Coarse-to-Fine: a Hierarchical Diffusion Model for Molecule Generation in 3D☆50Updated 2 years ago
- ☆138Updated 6 months ago
- Learning Joint 2D & 3D Diffusion Models for Complete Molecule Generation☆51Updated 2 years ago
- This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).☆39Updated 5 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆121Updated last month
- ☆66Updated 6 months ago
- [Nat. Comm. 2024] Multimodal learning for chemical domain, with SMILES and properties.☆41Updated 11 months ago
- ☆25Updated 8 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆99Updated 7 months ago
- [ICLR 2023] "Mole-BERT: Rethinking Pre-training Graph Neural Networks for Molecules"☆128Updated 2 years ago
- Source code for "A universal framework for accurate and efficient geometric deep learning of molecular systems" (Nature Scientific Report…☆72Updated last month
- ☆50Updated 3 years ago
- ☆60Updated last year
- ☆64Updated 2 years ago
- The official implementation of DecompDiff: Diffusion Models with Decomposed Priors for Structure-Based Drug Design (ICML 2023)☆69Updated 2 years ago