Alternatives and similar repositories for TOMG-Bench

Users that are interested in TOMG-Bench are comparing it to the libraries listed below

• lsh0520 / 3D-MoLM
  ☆51Updated last year
• IDEA-XL / InstructMol
  InstructMol: Multi-Modal Integration for Building a Versatile and Reliable Molecular Assistant in Drug Discovery (COLING 2025)
  ☆52Updated last year
• KyGao / Mol-StrucTok
  Serializing molecule 3D structures
  ☆14Updated last year
• phenixace / MolReGPT
  ☆52Updated last year
• MingyuJ666 / ProLLM
  [COLM'24] We propose Protein Chain of Thought (ProCoT), which replicates the biological mechanism of signaling pathways as language promp…
  ☆70Updated last month
• mlvlab / LLaMo
  Official Implementation (Pytorch) of the "LLaMo: Large Language Model-based Molecular Graph Assistant", NeurIPS 2024
  ☆33Updated 11 months ago
• KehanGuo2 / MolPuzzle
  [NeurIPS 24] Can LLMs Solve Molecule Puzzles? A Multimodal Benchmark for Molecular Structure Elucidation
  ☆17Updated last week
• bbsbz / ChemMLLM
  ☆15Updated 7 months ago
• cnedwards / text2mol
  Repository for Text2Mol: Cross-Modal Molecular Retrieval with Natural Language Queries
  ☆48Updated 9 months ago
• YangLing0818 / IRDiff
  [ICML 2024] Interaction-based Retrieval-augmented Diffusion Models for Protein-specific 3D Molecule Generation
  ☆34Updated last year
• ChemFoundationModels / ChemLLMBench
  Official Code for What can Large Language Models do in chemistry? A comprehensive benchmark on eight tasks (In NeurIPS 2023)
  ☆167Updated last year
• NYUSHCS / MolecularGPT
  ☆38Updated last year
• hanrthu / CoPRA
  [AAAI 2025] CoPRA: Bridging Cross-domain Pretrained Sequence Models with Complex Structures for Protein-RNA Binding Affinity Prediction
  ☆33Updated last year
• AI-HPC-Research-Team / GIT-Mol
  A Multi-modal Large Language Model for Molecular Science with Graph, Image, and Text
  ☆36Updated 2 months ago
• CRIPAC-DIG / tgm-dlm
  Code for AAAI24 paper Text-Guided Molecule Generation with Diffusion Language Model
  ☆29Updated 6 months ago
• ProtLLM / ProtLLM
  [ACL 2024] ProtLLM: An Interleaved Protein-Language LLM with Protein-as-Word Pre-Training
  ☆50Updated last year
• smiles724 / InstructMol
  ☆17Updated 6 months ago
• eltociear / MolCA
  Code for EMNLP2023 paper "MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adapter".
  ☆12Updated 2 years ago
• ddz16 / MoMu
  The PyTorch implementation of MoMu, described in "Natural Language-informed Modeling of Molecule Graphs".
  ☆29Updated 2 years ago
• QizhiPei / BioT5
  BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)
  ☆123Updated last year
• fengshikun / UniMAP
  ☆15Updated last year
• ChnQ / LLM4Mol
  Code implementation for paper "Can Large Language Models Empower Molecular Property Prediction?"
  ☆39Updated 2 years ago
• GLAD-RUC / ESTAG
  The source code of "Equivariant Spatio-Temporal Attentive Graph Networks to Simulate Physical Dynamics"
  ☆27Updated last year
• syr-cn / ReLM
  [EMNLP 2023] ReLM: Leveraging Language Models for Enhanced Chemical Reaction Prediction.
  ☆22Updated last year
• syr-cn / ReactXT
  [ACL 2024] ReactXT: Understanding Molecular “Reaction-ship” via Reaction-Contextualized Molecule-Text Pretraining. by Zhiyuan Liu*, Yaoru…
  ☆25Updated last year
• kosonocky / CheF
  ☆14Updated last year
• pnnl / cactus
  LLM Agent that leverages cheminformatics tools to provide informed responses.
  ☆46Updated 6 months ago
• OSU-NLP-Group / LLM4Chem
  Official code repo for the paper "LlaSMol: Advancing Large Language Models for Chemistry with a Large-Scale, Comprehensive, High-Quality …
  ☆102Updated 7 months ago
• lamm-mit / ProtAgents
  ☆42Updated last year
• wuhuaijin / EBMDock
  Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (IC…
  ☆14Updated last year