Alternatives and similar repositories for KV-PLM

Users that are interested in KV-PLM are comparing it to the libraries listed below

• blender-nlp / MolT5
  Associated Repository for "Translation between Molecules and Natural Language"
  ☆191Updated 2 years ago
• Fangyinfff / KCL
  Code and Data for the paper: Molecular Contrastive Learning with Chemical Element Knowledge Graph [AAAI 2022]
  ☆90Updated last year
• HICAI-ZJU / KANO
  Code and data for the Nature Machine Intelligence paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt".
  ☆135Updated last year
• zjunlp / NLP4SciencePapers
  Must-read papers on NLP for science.
  ☆57Updated 2 years ago
• zjunlp / OntoProtein
  [ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding
  ☆149Updated 9 months ago
• cnedwards / text2mol
  Repository for Text2Mol: Cross-Modal Molecular Retrieval with Natural Language Queries
  ☆48Updated 8 months ago
• QizhiPei / BioT5
  BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)
  ☆122Updated last year
• GT4SD / multitask_text_and_chemistry_t5
  Code for "Unifying Molecular and Textual Representations via Multi-task Language Modelling" @ ICML 2023
  ☆45Updated last year
• hwwang55 / MolR
  Chemical-Reaction-Aware Molecule Representation Learning
  ☆81Updated 3 years ago
• QizhiPei / SSM-DTA
  SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)
  ☆55Updated last year
• yuewan2 / Retroformer
  ☆49Updated 3 years ago
• ZJUFanLab / KANO
  Code and data for the Nature Machine Intelligence paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt".
  ☆10Updated 2 years ago
• zjunlp / MolGen
  [ICLR 2024] Domain-Agnostic Molecular Generation with Chemical Feedback
  ☆181Updated 11 months ago
• linjc16 / Pisces
  [RECOMB 2023] Official implementation of "Pisces: A combo-wise contrastive learning approach to synergistic drug combination prediction".
  ☆14Updated 2 years ago
• phenixace / MolReGPT
  ☆51Updated last year
• teslacool / UnifiedMolPretrain
  Unified 2D and 3D Pre-Training of Molecular Representations
  ☆30Updated 3 years ago
• SCIR-HI / MolTailor
  Repository for AAAI 2024 paper "MolTailor: Tailoring Chemical Molecular Representation to Specific Tasks via Text Prompts"
  ☆22Updated last year
• AI-HPC-Research-Team / GIT-Mol
  A Multi-modal Large Language Model for Molecular Science with Graph, Image, and Text
  ☆34Updated last month
• jshmjs45 / data_for_chem
  Data for our paper "Chemical Reaction Practicality Judgment via Deep Symbol Artificial Intelligence"
  ☆23Updated 2 years ago
• ProtLLM / ProtLLM
  [ACL 2024] ProtLLM: An Interleaved Protein-Language LLM with Protein-as-Word Pre-Training
  ☆50Updated last year
• dual-view-molecule-pretraining / dmp
  ☆11Updated 4 years ago
• stardj / PharmHGT
  Repo of pharmacophoric constrained heterogeneous-graph-transformer
  ☆17Updated 2 years ago
• BingSu12 / MoMu
  ☆24Updated 3 years ago
• uta-smile / SMILES-BERT
  ☆51Updated 5 years ago
• SongtaoLiu0823 / FusionRetro
  [ICML 2023] FusionRetro: Molecule Representation Fusion via In-Context Learning for Retrosynthetic Planning
  ☆21Updated last year
• HICAI-ZJU / InstructProtein
  Code and data for the ACL2024 paper "InstructProtein: Aligning Human and Protein Language via Knowledge Instruction".
  ☆22Updated last year
• zhang-xuan1314 / Molecular-graph-BERT
  semi-supervised learning for molecular property prediction
  ☆52Updated 4 years ago
• zjunlp / Mol-Instructions
  [ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models
  ☆288Updated last year
• 545487677 / MolReasoner
  This is the official code for MolReasoner: Toward Effective and Interpretable Reasoning for Molecular LLMs
  ☆43Updated 3 months ago
• smiles724 / Molformer
  ☆96Updated 5 months ago