Alternatives and similar repositories for TOMAAT-Slicer:

Users that are interested in TOMAAT-Slicer are comparing it to the libraries listed below

• faustomilletari / TOMAAT
  TOMAAT server-side
  ☆25Updated 5 years ago
• masadcv / ECONet-MONAILabel
  Official Implementation of ECONet: Efficient Convolutional Online Likelihood Network for Interactive Segmentation
  ☆16Updated 2 years ago
• bhklab / med-imagetools
  Transparent and reproducible medical image processing pipelines in Python.
  ☆46Updated this week
• AnnekeMeyer / zone-segmentation
  Segmentation of prostatic zones (peripheral zone, central gland, AFS and distal prostatic urethra )
  ☆19Updated 4 years ago
• rundherum / pymia
  pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis
  ☆61Updated 5 months ago
• lassoan / SlicerElastix
  This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.
  ☆53Updated 3 months ago
• sbonaretti / pyKNEEr
  An image analysis workflow for open and reproducible research on femoral knee cartilage
  ☆33Updated 10 months ago
• lassoan / slicerio
  Utilities for reading and writing files created by 3D Slicer
  ☆39Updated 3 months ago
• JoostJM / SlicerCaseIterator
  Simple Scripted Module to batch process patients in 3D Slicer
  ☆13Updated 6 months ago
• mattiaspaul / OBELISK
  MIDL 2018 / MEDIA 2019: one binary extremely large and inflecting sparse kernel (pytorch)
  ☆44Updated 5 years ago
• raidionics / Raidionics
  Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes
  ☆38Updated this week
• mehrtash / Prostate-Segmenter
  Prostate gland segmentation with deep Convolutional Neural Networks
  ☆10Updated 7 years ago
• ubern-mia / MIALab
  Medical Image Analysis Lab (MIALab), University of Bern
  ☆27Updated 11 months ago
• ad12 / DOSMA
  An AI-powered open-source medical image analysis toolbox
  ☆62Updated 8 months ago
• baiwenjia / CIMAS
  Cardiac Image Multi-Atlas Segmentation pipeline (CIMAS)
  ☆50Updated 8 years ago
• Project-MONAI / MONAIBootcamp2020
  Material for the 2020 MONAI Bootcamp
  ☆66Updated 4 years ago
• DeepInfer / Slicer-DeepInfer
  3D Slicer Module for connecting to model repository and use models for image analysis.
  ☆26Updated last year
• lassoan / SlicerSegmentationRecipes
  Recipes for common medical image segmentation tasks using 3D Slicer
  ☆55Updated 2 years ago
• comic / evalutils
  evalutils helps users create extensions for grand-challenge.org
  ☆23Updated 3 weeks ago
• Slicer / SlicerNotebooks
  Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python
  ☆75Updated 2 years ago
• NA-MIC / ProjectWeek
  Website for NA-MIC Project Weeks
  ☆86Updated this week
• jupito / dwilib
  Tools for Diffusion-weighted imaging (DWI)
  ☆9Updated 5 years ago
• pieper / dicomsort
  A project to provide custom sorting and renaming of dicom files
  ☆78Updated 10 months ago
• SlicerProstate / mpReview
  3D Slicer extension for streamlined annotation of images
  ☆11Updated last year
• MIC-DKFZ / BodyPartRegression
  ☆69Updated last year
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆71Updated this week
• MIC-DKFZ / RegRCNN
  This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…
  ☆51Updated 2 years ago
• fepegar / SlicerTorchIO
  3D Slicer module for TorchIO.
  ☆21Updated last year
• ReubenDo / InExtremIS
  Official PyTorch implementation of InExtremIS
  ☆22Updated 3 years ago
• InsightSoftwareConsortium / ITKPythonPackage
  A setup script to generate ITK Python Wheels
  ☆64Updated last month