Extension for 3D Slicer that allows the application to be used from Jupyter notebook
☆259Aug 9, 2024Updated last year
Alternatives and similar repositories for SlicerJupyter
Users that are interested in SlicerJupyter are comparing it to the libraries listed below
Sorting:
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python☆78Sep 20, 2022Updated 3 years ago
- Build, package, test, and run 3D Slicer and Slicer Extensions in Docker.☆72Updated this week
- Slicer extension for TOMAAT☆17Jun 18, 2024Updated last year
- An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point …☆621Mar 13, 2025Updated 11 months ago
- Jupyter Interactive Widgets library for 3-D mesh analysis☆15Jun 17, 2020Updated 5 years ago
- Materials for the yearly PerkLab bootcamp course☆96Jul 29, 2025Updated 7 months ago
- This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.☆36Jun 7, 2025Updated 9 months ago
- Multi-platform, free open source software for visualization and image computing.☆2,353Updated this week
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆115Dec 18, 2025Updated 2 months ago
- Recipes for common medical image segmentation tasks using 3D Slicer☆61Jul 26, 2022Updated 3 years ago
- Website for NA-MIC Project Weeks☆92Updated this week
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- Client side integration example source code and libraries for AI-Assisted Annotation SDK☆319Apr 23, 2024Updated last year
- Template to be used as a starting point for creating a custom 3D Slicer application☆67Jan 23, 2026Updated last month
- Material for the 2020 MONAI Bootcamp☆64Jan 25, 2021Updated 5 years ago
- Vascular Tree Synthesis Software. You will need CMake and ITK to run VascuSynth. Read the paper in the Insight Journal for instructions…☆12Jan 24, 2018Updated 8 years ago
- 3D Slicer extension for streamlined annotation of images☆11Apr 23, 2024Updated last year
- Building a PyPI wheel for xeus-python☆13Updated this week
- 3-D Scientific visualization using ThreeJS☆22Sep 29, 2022Updated 3 years ago
- Chest Imaging Platform (CIP)☆60Jan 22, 2026Updated last month
- An extension to 3D Slicer to support quantitative imaging and image-guided interventions research in prostate cancer.☆22Feb 25, 2025Updated last year
- Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model☆242Feb 21, 2026Updated 2 weeks ago
- MONAI Label is an intelligent open source image labeling and learning tool.☆814Updated this week
- Example Application for Slicer Customization - Generated from KitwareMedical/SlicerCustomAppTemplate☆15Mar 9, 2023Updated 2 years ago
- Book of 3D Slicer.☆12Feb 12, 2018Updated 8 years ago
- Multi-lingual medical image registration library☆537Jun 15, 2023Updated 2 years ago
- Notes and experiments in Jupyter dashboarding☆16Apr 17, 2021Updated 4 years ago
- ☆23Aug 18, 2025Updated 6 months ago
- Versatile tree-viewer/filebrowser widget, built on top of regular-table☆14Nov 12, 2023Updated 2 years ago
- Simple Scripted Module to batch process patients in 3D Slicer☆16Jun 26, 2025Updated 8 months ago
- Slicer modules that support web services and web applications☆26May 22, 2023Updated 2 years ago
- ☆36May 10, 2022Updated 3 years ago
- Create volumetric mesh from segmentation using Cleaver2 or TetGen☆33Jun 27, 2024Updated last year
- 🔗 minimalist ipywidget to interface with any Python vtkRenderWindow☆103Sep 30, 2022Updated 3 years ago
- Tool for robust segmentation of >100 important anatomical structures in CT and MR images☆2,502Feb 11, 2026Updated 3 weeks ago
- Ultrasound image formation, processing, and analysis. Interfaces built off the ITKUltrasound library.☆27Jan 30, 2024Updated 2 years ago
- An image analysis workflow for open and reproducible research on femoral knee cartilage☆33Jun 21, 2024Updated last year
- an unofficial Georgia Tech theme for JupyterLab☆10Jun 29, 2021Updated 4 years ago
- Python package to simplify access to the data available in NCI Imaging Data Commons☆20Updated this week